Candidatus Fluviicola riflensis: CHH17_01940
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Entry
CHH17_01940 CDS
T05019
Name
(GenBank) hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00540
Lipopolysaccharide biosynthesis
flu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CHH17_01940
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
flu01005
]
CHH17_01940
Enzymes [BR:
flu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
CHH17_01940
Lipopolysaccharide biosynthesis proteins [BR:
flu01005
]
Core region
CHH17_01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
ASS47528
LinkDB
All DBs
Position
462396..463649
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AA seq
417 aa
AA seq
DB search
MNRHFEKILITWLGLIALIICLWPKGIVLGIAGLAVLVIYGYVIKKIAFQWSLPAIAFIA
LYATYFIGTFFTHHQQLANHYIESKLSFVVFPLLLSFRFKQQVDWRPVVLGLTAGIIGVS
IIGFVNATQTYGKTGDLMASFTTSNFSNIHHPSYLCVFILTAATLLWHGYRRQWHGFSLK
WILPVYIYFFLIYGLCLSLAGILLLFVLTGILTMRWIYRRFGKKVFFGALILLPTLCIPL
FLVIPQMKQQFGDASKYFLEFAESPSGFVRAKQGYKEGNEVRLIMWTVASEEFLQHPFGV
GTGNVDDHLSYRLTLYGQTEMAKKDGENGIHYNPHNQFLQTALEIGIIGLLILVTLFGSV
LRFAWKHRNYALLIMVSCLVFNALFESMFQRQSGIVFFSFWICLLIVYSNSKQKDVA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgacatttcgaaaagatcctcattacctggcttgggctgattgcgctcatcatt
tgcctgtggcctaaaggcattgtattgggcattgcaggattggcggttttggtgatttac
gggtatgtcattaagaaaattgcgtttcaatggagcttgcctgcaattgcttttatcgct
ttgtacgcaacgtatttcataggaacttttttcacccatcaccagcaactggccaatcat
tacatcgaaagtaaattgtcgtttgtggtgtttccattactgctgtcttttcggtttaaa
caacaggtggattggcgtccggttgtactcggcttaaccgccggaatcatcggtgtttcg
atcattggatttgtgaatgcgactcagacctacggaaaaaccggtgatttaatggccagt
tttacaacgagcaacttctccaatattcaccatccgagttatctctgcgtgtttattctg
accgccgctactttgttgtggcatggataccgcagacaatggcacggattttccttaaaa
tggatccttccggtgtatatctactttttcctgatttacggattgtgtttgtcactggcg
ggcattttgctgttgtttgtgttgacgggtattttaacaatgcgctggatctaccgtcgt
ttcggcaaaaaagtctttttcggagcgttgatactgcttccgacgctatgtattccattg
tttttggtgattccgcaaatgaaacaacagttcggtgacgcgtcaaagtatttcctggaa
tttgcagaaagtccttccggatttgtgagagccaaacagggctacaaagaaggaaatgag
gtgcgtttgatcatgtggacagttgcttcagaagaatttttgcaacatccgttcggagta
ggaacgggcaatgttgacgatcatttgagttatcggcttacgctctacggtcaaaccgaa
atggcaaaaaaagacggtgaaaatggtattcattacaatccgcacaaccagtttttgcaa
acagcgctcgaaatcgggatcatcggattgttgattctcgtcacactgtttggttccgta
cttcgttttgcatggaaacatcgtaattatgccttgctgatcatggtttcctgcctggtt
ttcaacgcactgttcgaatcgatgttccagcgccaaagcggtattgtcttcttcagtttc
tggatctgtttactcattgtttattccaattccaagcaaaaagatgtcgcttaa
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