Candidatus Fluviicola riflensis: CHH17_02095
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Entry
CHH17_02095 CDS
T05019
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00470
D-Amino acid metabolism
flu00550
Peptidoglycan biosynthesis
flu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CHH17_02095 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHH17_02095 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flu01011
]
CHH17_02095 (murD)
Enzymes [BR:
flu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CHH17_02095 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
flu01011
]
Precursor biosynthesis
Amino acid ligase
CHH17_02095 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox_3
FAD_oxidored
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ASS47556
LinkDB
All DBs
Position
496488..497831
Genome browser
AA seq
447 aa
AA seq
DB search
MDLNTKIVVILGAGESGVGAAILAQAKGAKVFVSDYGTVKPSFQQELGEYGLEWEQGTHS
MERILEADLIVKSPGIPEKTPVMKAIREKGIKVVSEIELAGYFTTAKKVCITGSNGKTTT
TMMIHHLLTKAGMNVGLAGNVGYSFAKQVALENKEIYVLELSSFQLDDMEDFRADIAILT
NITPDHLDRYEYNMQLYVDSKFRILQNQTAEDYFIYNADDPIINAELEKRSIASQLLPFS
LTKTFEKGAYIANKQLIINFNNQFIMSIHDLALKGKHNTQNSLASGLAGRLLDIRKDVVR
ESLSDFVNVEHRLEFVAKVCGIEFINDSKATNVNSTWFALESMENPTVWIVGGVDKGNDY
SELTELVKEKVKAIICLGKDNQKIIDAFSGMVETIVEAGSAMEAVAYGYRLAKKDETVLL
SPCCASFDLFENYEDRGNQFKQAVRSL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggacttgaacaccaaaatagtagtgattttgggcgccggcgaaagcggtgtcggagca
gccattttagcgcaagcgaaaggggcgaaggtcttcgtgtccgattacgggaccgtgaaa
ccatcgtttcagcaggaattaggtgaatacggtttggaatgggaacaaggaacacattcc
atggagcgcattctggaagctgatctcatcgtgaaatcgccgggcattccggaaaaaaca
cccgtgatgaaagccattcgcgaaaaagggatcaaagtggtttccgaaatcgagctggcg
ggctatttcaccacggcaaaaaaagtgtgcatcacaggaagcaacggaaaaacgaccacc
accatgatgattcatcacctgctcaccaaagccggaatgaatgtgggattggccggaaac
gtgggctacagttttgccaaacaggttgcattggaaaacaaggaaatctatgtgttggaa
ctgagttcatttcagctcgatgacatggaagatttccgcgctgatattgccattcttacc
aacataacacccgatcatttggatcggtacgaatacaacatgcaattgtacgtggattca
aaattccgcattctgcaaaaccagactgccgaagattatttcatctacaatgccgatgat
ccgatcatcaacgccgaactggagaaacgctccatagcgtcacaattgcttccgttttcg
ttgactaaaaccttcgaaaaaggagcttacatagcaaacaaacaactcatcataaacttt
aacaatcagttcattatgtctatacatgatttagcactaaagggtaaacacaacacccaa
aattcactagcttcagggttagccggtcgcttgttggatatccgcaaggatgttgtgcgc
gaaagtctgtcagacttcgtcaatgtggaacaccgtttggagttcgtggccaaagtatgt
ggcatcgaattcatcaacgattccaaagctaccaatgtcaattcaacctggtttgccttg
gaaagcatggaaaacccgacggtttggatcgtaggtggtgtcgacaaaggcaacgactac
agcgaattgaccgaattggtcaaagaaaaagtaaaagccatcatctgtttggggaaagac
aaccagaagatcatcgatgctttttcaggtatggtagaaaccatcgtagaagcaggttcc
gcaatggaagcggtggcttacggttatcgtttggccaaaaaagacgaaacggtattgttg
tcgccatgctgcgcgagtttcgacttgttcgaaaattacgaggaccgtggtaatcagttc
aagcaggcagttcgttcgctttaa
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