Candidatus Fluviicola riflensis: CHH17_02230
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Entry
CHH17_02230 CDS
T05019
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHH17_02230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flu02000
]
CHH17_02230
Transporters [BR:
flu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CHH17_02230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
AAA_15
AAA_22
AAA_7
AAA_23
AAA_25
TsaE
Motif
Other DBs
NCBI-ProteinID:
ASS47581
LinkDB
All DBs
Position
complement(524906..526666)
Genome browser
AA seq
586 aa
AA seq
DB search
MASQTKMDTRIFSRLFKFTKPYRGKLIFAFLCALTLALLSPMRPLLIVYIVNKYVLETPD
GTQFGMWLLLVFGMLFLEAVLQFSATYFSNLLAQSVIRDIRVKVFSHITTFRMRYFDKTP
VGNLVTRVVSDIEAISEVFSSGLIDIISDLLMLVVIIVVMFVINWQLTALALIPALVLIY
ATRVFARAMRKSFQQESTQVNRLNTFVQERITGMNIVQLYGREEVEYKAFEEINKDHRQA
HINAVWAFSIFFPVVEFLSSFSTAFLILWGAYVFTGPVAPEKNVFLDIFAFSMWISMMYR
PIRQLADKFNILQRGVVRAERVFQIIDTEEHVQESGTVDDCDFQQELRFQNVSFAYTDDQ
PVLKNINLTIEPGKTVAFVGATGAGKTSIVNLLGRFYEYQQGEIYIGEHELRSIKMDYLR
KNIAIVLQDIFLFSDTVHNNITLGNPDISREQVIEAARAVGADYFIQLLPGGYDYQVGER
GGVLSVGQRQLLAFIRAYVYNPHILILDEATSSVDNESEEMIQEATAKLTEGRTSIVIAH
RLSTIQQADTIVVLDKGEIKEMGSHDELLQLDGYYKRLFTMQFARS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcaaaccaaaatggacacccgaattttctcgcggttatttaagttcaccaaa
ccgtatcgcggtaagttgatctttgcctttttgtgtgcactcacactagctttgctttct
cccatgcgccccttgctgatcgtttacatcgtgaacaaatacgttttggaaacaccggac
ggaacccaattcggaatgtggctgctacttgttttcggaatgttgttcctggaggcagtt
ttgcagttttcggcaacgtatttcagtaacctgctcgcacaatcggttattcgcgacatc
cgtgtgaaagtcttttcccatattacgacgttccgcatgcgctatttcgacaaaacaccg
gttgggaatctcgtaacgcgcgtggtttcggatatcgaagccatttcggaagtgttttca
tccggactcattgatattatcagtgatttgctgatgctcgtggtgatcatagtagtgatg
tttgtgatcaactggcaactcaccgcgttagcactgattccggcgttggtattgatctat
gcaacccgtgtatttgcgcgcgctatgcgtaaatcatttcagcaggaaagcacccaggta
aaccggctcaacacgtttgttcaggagcgcattacgggtatgaacatcgtgcaattgtat
ggccgtgaagaagtggaatacaaagcattcgaggaaattaacaaggatcaccgacaagca
cacatcaatgccgtttgggcattttcgattttctttccggtggtcgaattcctgagttcg
ttttcaactgctttcctgattttatggggagcttacgtgttcaccggtcctgttgctccg
gagaaaaacgtctttctggacattttcgccttttcgatgtggatcagtatgatgtaccgg
cccattcgtcagctcgcagataaattcaatattcttcaacgtggagtagttcgcgccgaa
cgtgtattccagatcatcgatactgaagaacatgtacaggaatccggaactgtcgatgat
tgcgattttcaacaggaactgcgttttcagaatgtttcgtttgcgtataccgacgatcag
ccggtgctgaaaaatatcaatctaactattgaaccgggaaaaactgtcgcgtttgtggga
gcaaccggcgcaggaaaaacatcgattgtgaacctactcgggcgattttacgaataccag
caaggcgaaatttacattggtgaacacgaattgcgttccatcaaaatggattacctccgt
aaaaacatcgcaatcgtgttacaggatattttcctgttttcggatacggtacacaacaat
attacgctcggaaatccggatatttcacgtgagcaggtcattgaagcggccagagccgtt
ggtgccgattacttcattcaactgcttcccggaggatacgattaccaggttggtgaacgc
ggcggcgtactttctgtcggtcagcggcagttgctggcgtttatccgggcgtatgtttac
aatccgcatatcctgattttggatgaagccacttcaagcgtcgacaacgaatcggaggaa
atgatccaggaagccaccgcaaaattgacggagggcagaacttccatcgtgatcgcccat
cggttatcgacgattcaacaagcagacacaattgtggtactcgacaaaggtgaaatcaag
gaaatgggatcgcacgacgaacttttacaactcgacggttattataagcgtttatttacc
atgcaatttgcacgatcatga
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