Candidatus Fluviicola riflensis: CHH17_02895
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Entry
CHH17_02895 CDS
T05019
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00730
Thiamine metabolism
flu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CHH17_02895 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
flu03009
]
CHH17_02895 (rsgA)
Enzymes [BR:
flu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
CHH17_02895 (rsgA)
Ribosome biogenesis [BR:
flu03009
]
Prokaryotic type
GTPases
CHH17_02895 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
RsgA_N
MMR_HSR1
eIF-1a
ABC_tran
AAA_16
AAA_29
Septin
AAA_23
DUF815
nSTAND1
FeoB_N
MMR_HSR1_Xtn
NTPase_P4
FtsK_SpoIIIE
MobB
AAA_7
AAA_18
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASS47711
LinkDB
All DBs
Position
680049..681002
Genome browser
AA seq
317 aa
AA seq
DB search
MSQIKGKVLKSTGKWYQVMLEDGSQIDCRIRGRLRLEGLRTTNPISVGDVVLISEKFDEE
GKGVIEDYEHRRNYIVRKSTNLSKQSHILAANVDRAYLLVTLKHPETHTVFIDRFLVAAE
SFRIETTLLFNKIDLLTEDERYDLEAIMDMYRVIGYRCEAISASNQENIDFLREEISGNQ
VMIAGHSGTGKSTLVNALDPNLDLRIGEISNAHQQGQHTTTFAEMHPLQSGGFIIDTPGI
RAFGIVDLDKEVISHYFPEMRALIGECKFHNCQHINEPGCAVKAGVENGTIYESRYWTYM
QLMTGDDQDVHRRNKHT
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaataaaagggaaagttttaaaatctaccggaaagtggtaccaggtaatgctc
gaagacggaagtcagatcgattgccggattcgcgggcgtttgcgactggaaggattgcgt
acgaccaatccgatttcggtaggtgatgtagtgctgatcagcgaaaagttcgatgaagaa
ggcaaaggcgtaattgaggattacgaacatcgtcgcaattacattgtgcgaaaaagcacg
aatctaagtaaacagtcgcacattcttgcagccaatgttgaccgtgcttatttattggtc
acgctgaaacatcctgaaacacatacggtgttcatcgaccggtttttggtggcggcagaa
tcgtttcggatcgagaccactcttttgttcaataaaattgatttactaaccgaagatgag
cgttacgatctggaagcaatcatggatatgtaccgtgtaattggttaccgttgcgaagct
atttcggcttccaaccaggagaatattgattttttacgcgaagaaatttcaggaaaccag
gtgatgatcgccggacattccggaaccggaaaaagcacgttggtcaatgcacttgatccg
aatcttgatctgcggatcggggagatttccaatgcgcatcaacaaggacagcatacaact
acgttcgccgaaatgcatccgttgcagtcgggtggatttatcattgacacgccgggcatt
cgcgcgtttgggattgtggatcttgacaaggaagtgatttctcattatttccctgaaatg
cgcgccctgatcggagaatgcaaatttcataattgtcagcatatcaacgagccgggttgc
gcggtgaaagcaggcgtagaaaacggcactatttacgaatcacgctactggacctatatg
cagctcatgaccggcgatgatcaggatgttcaccgaagaaataaacatacatga
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