Candidatus Fluviicola riflensis: CHH17_03655
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Entry
CHH17_03655 CDS
T05019
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CHH17_03655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
T2SSK
HHH_6
ATP-synt_ab_C
Motif
Other DBs
NCBI-ProteinID:
ASS47851
LinkDB
All DBs
Position
860157..862268
Genome browser
AA seq
703 aa
AA seq
DB search
MQKNDFVQSNSGLQPKAILQTIQLLESGATVPFIARYRKEQTGGLDEVEIALIRDLAKKH
DELISRQQTILSAIEEQGKLTPELKSKIEDCFESNVLEDLYLPYKQKRLTKGEKARKLGL
EPLARMIMSQRGGDPEQMAERFLKGEVFDEQMAIQGACDIIAEWINENAVARARMRTTFQ
RKAILQSKLVKGKEEEGAKYRDYFDFSEPLYRTASHRFLALYRAEREGIISLKAQPEKEA
AIDQLERFFVKGDDACADLVADTCKDAYTRLMCPSLENEVLNEAKEKADKEAIKVFSTNL
RQLLLAPPVGSKRILAIDPGFRTGCKVVCLDESGSLLTNATIYPHAPQNETDKAMAKISQ
LVQAYKIEAIAIGDGTAGRETESFIKRVRFDRDLDVYVVREDGASIYSASPIARKEFPDY
DVTVRGSVSIGRRLMDPLAELVKIDPKSVGVGQYQHEVNQHQLKDALDDVIVSCVNAVGV
DLNTASPYLLSYVSGLGPALAENIVAYRSENGGFRSREELKKVKRLGDKAYEQAAGFLRV
RDGENPLDNSAVHPESYKVVNSIAKKAGLKLTELIGNETTLKTVNKTEFPEIDSYTFDDI
LRELKKPGRDPRKQAKVLEFDSRIRTMDDLRVGMSLTGIVTNVTNFGAFVNIGIKENGLI
HKSNLADVYVEDPSQFIALHEHVDVQVIEIDVPRKRVGLKRLV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaatgacttcgtacaatccaattcagggcttcagccaaaagcaattttacaa
accattcaattactggaatcaggtgctaccgttccgtttattgcccgttaccggaaagaa
caaacgggtggtctggatgaggtggaaattgcactgatccgcgatttggcgaagaaacac
gacgaactcatcagccgtcagcaaacgattttgtctgcaattgaagaacaaggaaagtta
acacccgaattgaagtcaaaaatcgaagactgttttgaatcgaatgttctcgaagatttg
tatttgccttataaacaaaagcgtttgaccaaaggtgaaaaagcccgtaaactgggattg
gaaccgctggcgcgtatgattatgtcacaacgtggcggtgatcccgagcaaatggcagag
cgtttcctgaaaggtgaagtgtttgatgaacaaatggccattcagggggcgtgtgatatt
atcgccgaatggatcaacgagaatgccgtggcgcgtgcacgtatgcgaaccacttttcag
cgcaaggctattttacaatcgaaactggtgaaaggaaaagaagaagaaggtgccaagtac
cgtgattatttcgatttttcggaaccgctttaccgcacggcttcacatcgtttcctggca
ttgtaccgtgccgaacgcgaaggaattatttccctgaaagcacaacccgaaaaagaagca
gcgattgatcaattggaacgcttttttgtaaaaggcgatgatgcctgcgctgatttggtg
gcagatacctgtaaagatgcttacacgcgattgatgtgtccttccttggaaaatgaagtg
ctgaacgaagcgaaggaaaaagcggataaagaagcgattaaagttttttcgaccaacctg
cgacaattattgttggctccgccggttggttccaaacgcattctggccatcgatccggga
ttcagaacgggttgtaaagtcgtgtgtttggacgaatccggctccctgcttaccaatgca
accatttacccgcatgcaccacaaaacgagacagataaggccatggcgaaaatttcgcag
ctggtacaggcctataaaatagaagcaattgccattggtgacggaacggccgggcgtgaa
accgaatcgtttatcaaacgtgtgcgtttcgaccgcgatttggatgtatacgtggtgcgc
gaagacggcgcttcgatttattccgcaagtccgattgcacgcaaagaatttcctgattac
gatgttaccgtgcgtggttcggtttctatcggacgtcgtttgatggacccgctggcggag
ttggtgaaaattgatccgaaatcggttggagttggacaataccagcacgaagtgaaccaa
catcaactcaaagacgcgcttgatgacgtgatcgtttcctgtgtaaatgccgttggcgtt
gacttgaataccgcgtcgccttatttattgagctatgtctcgggacttggacctgctttg
gctgaaaatattgttgcttatcgcagcgaaaatggtggtttccgttcacgcgaagaatta
aaaaaggtaaaacgcctcggtgataaagcctatgaacaagcagccggattcctacgggta
cgcgatggtgaaaatccactggataactctgccgttcaccctgaaagttacaaagtggtc
aattcaatcgctaaaaaagcaggactgaaactcactgaactgatcggcaatgaaacgacc
ctgaaaaccgtcaataagaccgaattccctgaaattgacagctatacattcgatgatatt
ctgcgtgagttaaagaaaccgggacgtgatccgcgcaagcaggccaaagtgttggaattt
gacagccgcattcgcaccatggacgatttacgcgtaggaatgagtctcactggaatcgtg
accaacgtcaccaatttcggggcttttgtcaatatcgggatcaaagaaaacggactcatc
cataaatcgaacctggctgatgtgtatgttgaagatccgtcgcaatttattgccttgcac
gaacacgtagatgtgcaggtaattgagattgatgttccgagaaaacgtgttgggttgaag
cgattagtgtga
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