Candidatus Fluviicola riflensis: CHH17_04080
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Entry
CHH17_04080 CDS
T05019
Name
(GenBank) hypothetical protein
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00300
Lysine biosynthesis
flu00550
Peptidoglycan biosynthesis
flu01100
Metabolic pathways
flu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CHH17_04080
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHH17_04080
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CHH17_04080
Enzymes [BR:
flu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
CHH17_04080
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ASS47930
LinkDB
All DBs
Position
complement(958043..959332)
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AA seq
429 aa
AA seq
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MDQIYNLFLQSSGVQTDTRTISKDCLFFCLKGGNFDGNKFAEEAIGKGALFTVIDNPDYT
IEGKTILVKDTLVALQQLAQHHRRQFQIPIIGITGSNGKTTSKELIAAVLQTQYEVLYTN
GNLNNHIGVPLTLLQLNSTHEIAVIEMGANKPGDIWELAEIAEPTHGIITNIGRAHLEGF
KTLEGVIQTKSELYRYIDQNREDGVLFVNNDDQILVKAVPVGTKLATYGNSGEVRGQLLR
LSPYVEMTWSYGNFTSHELKTHLVGQYNFINFLAAIRIGIYFDVTPENCSKAIESYVPSN
NRSQITETAKNTLIVDCYNANPTSMRSAIESFALIDNHVKIFILGDMREMGDDAEMVHEE
IVQLTIEHRLSGFFIGEEFLKWKHLHPNAIFLKSTEPLSEHFTQNPPEGLLILLKGSRGI
QLEKLLPLL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatctataaccttttcctgcaaagctcaggagtgcaaacggatacgcgaaca
atctcgaaagattgcctgtttttttgccttaaaggaggcaatttcgacggaaacaaattt
gccgaagaagctattggaaaaggagctttgtttactgtaatcgataatcctgattatacg
attgaaggaaaaaccatccttgtaaaagacacgcttgttgctttacaacaactggcacag
catcatcgacggcaatttcagattccgatcatcggcattacaggcagtaacggaaaaaca
acttccaaagaattgatagctgccgttctgcaaacacagtacgaggttctttacaccaac
ggaaatctgaacaaccatatcggagtgccgcttaccctactccaattaaattcgacgcat
gaaattgcagttattgaaatgggcgccaacaaacccggagatatttgggaattggctgaa
atagctgaaccaactcatggtatcatcaccaatatcggtcgcgctcacctggaaggattt
aaaacactggaaggtgtaattcaaacaaaaagtgagctgtatcgctatattgaccaaaat
cgtgaggatggcgtcttgtttgtgaacaatgatgaccaaatcctggtaaaggcagttcct
gtcggaacaaaactcgcaacttatggaaactcaggtgaagtccgcgggcaattactgcgg
ttgagtccgtatgtagaaatgacctggagctacggcaattttacaagtcacgaactgaag
acacatttggttggacagtataacttcatcaattttctggcagcaatccgaattgggatc
tacttcgacgttactcctgagaattgctcaaaagcgattgaaagctatgtgccgtcaaac
aatcgatctcagatcacagaaacagctaaaaacacacttattgttgattgctacaatgcc
aatccgacaagtatgcgctcggcgattgagagttttgcactgatcgacaaccatgtgaag
attttcattttgggtgatatgcgcgaaatgggagacgacgcggaaatggtgcatgaagaa
attgtacagttaacgatcgagcaccgattaagcggcttttttataggtgaggaatttctg
aaatggaaacacttacatccgaatgcgatctttctgaaatcaactgaaccgttgagtgag
catttcacacaaaatccaccggaaggattattgatcttattgaaagggtcgagaggtata
cagctggagaagttgttgccgttgctttag
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