Candidatus Fluviicola riflensis: CHH17_04620
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Entry
CHH17_04620 CDS
T05019
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu03030
DNA replication
flu03430
Mismatch repair
flu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHH17_04620
03430 Mismatch repair
CHH17_04620
03440 Homologous recombination
CHH17_04620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flu03032
]
CHH17_04620
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_04620
Enzymes [BR:
flu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHH17_04620
DNA replication proteins [BR:
flu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHH17_04620
DNA repair and recombination proteins [BR:
flu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHH17_04620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Rv2179c-like
RNase_H_2
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
ASS48032
LinkDB
All DBs
Position
complement(1080874..1081737)
Genome browser
AA seq
287 aa
AA seq
DB search
MNLALQRPFAVFDLETTGVNVTQDRIVEIAIIKVHPDGTEEEYSKRVHPTIPIPKESSEI
HGIWDKDVENAPKFAEIADEVAAFIGDADLAGYNSNKFDIPVLAEEFLRCNHSFDVRLRK
FVDVQNIFHKMEQRTLAAAYQFYCQQNMENAHNALYDTRVTLDVFKAQLTRYQDLAKTVE
GLAEFSRQGNVEWHDFAGRLAVNEKGQVMYNFGKHKGKTVEEIGESEPGYYGWILDADFP
LYTKQLLRNEMERIKQSKRAAVAVKQVPEDNASIEDKLAALKNKFSK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagctcttcaacgtccattcgctgtatttgatctcgaaacaaccggtgtgaat
gtcacccaggatcgtatcgttgaaattgcgattatcaaggttcaccctgatggcaccgag
gaagaatattccaaacgcgtccaccctactattcccattccgaaagaatcgagtgaaatt
cacggaatctgggataaagacgttgaaaacgctcccaaatttgccgaaatagctgacgaa
gtagcggcgtttatcggtgatgccgatctggcaggatacaactccaataaatttgacatt
ccagttttggcagaagagtttttgcgttgcaatcattcattcgatgtgcgtttgcgcaag
tttgtggatgtacagaacatctttcacaagatggagcaacgcacactggcggcggcttat
caattctactgtcagcagaacatggagaatgcccataatgccttgtatgatacccgcgta
acgctggatgtgtttaaagcgcagctgacacgttatcaggatttagccaaaacggtagaa
ggtttggcagaattctcgcgccagggcaatgtagaatggcacgatttcgccggacgtttg
gcagttaatgaaaaaggccaggtgatgtacaatttcgggaaacataaaggtaagaccgtt
gaagaaataggtgaatcggaaccgggttattacggttggatccttgatgctgatttcccg
ctctataccaaacaattgctccgcaacgaaatggagcgcatcaaacaatccaaacgcgct
gcagtagctgtaaaacaagttcccgaagacaatgccagcatcgaagacaaactggctgcg
ctcaaaaataaattttcaaaataa
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