Candidatus Fluviicola riflensis: CHH17_04950
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Entry
CHH17_04950 CDS
T05019
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CHH17_04950 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_04950 (priA)
Enzymes [BR:
flu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHH17_04950 (priA)
DNA repair and recombination proteins [BR:
flu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CHH17_04950 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
Cas3-like_C_2
nSTAND3
AAA_19
AAA_30
IstB_IS21
DnaB_C
ATPase
AAA_16
ADDB_N
Zn_ribbon_6
SLFN-g3_helicase
NPHP3_N
ATPase_2
DUF3638
Sigma54_activat
Zeta_toxin
AAA_22
AAA_7
HypA
Motif
Other DBs
NCBI-ProteinID:
ASS48096
LinkDB
All DBs
Position
complement(1178089..1180572)
Genome browser
AA seq
827 aa
AA seq
DB search
MSERQTLFVDVIIPIALSQEFTYRVPFELNDELKPLVRVIVPFGKGKLYTALVTRIHEEV
PTVYQAKYIEHVLDDTPLITPVQYRFWKWISTYYMAPIGDVMNAALPANFKLASETKIVL
HPDFDEKATTLDDREFLIVEALTVQDTLDLREISEIVGIKTIQPIIKRMIERKIVLSKEE
VNDKFTPKTGLFVVLEDSYADEEQLNFLLGEIGAKKSNAKQEQVILTLLQSGGFENNMAV
PVLRRDLEEKGCSLSAINTLEKRGVLRIERREISRLGANDASAFSFPVLSVPQTKALDEI
YAQFEHKNTVLLHGITGSGKTEIYIHLIQEALNQGKQVLYLVPEIALTTQLIQRLAAYFG
QQIGVYHSRFNANERVEIWQKVLENNLQQFRIVIGARSSVFLPFRELGLVIVDEEHENSF
KQHDPSPRYNGRDAAIVLAGLFKAKTVLGSATPAIESYQNVREEKYGYVELNERFSSVKL
PEICCADMKKERINKTVQGHFSRFLLEEMTAALERNEQIILFQNRRGYTPIWACEMCGYN
PNCKNCDTTLTYHKQTNLLKCHHCSYHTAPIGTCPACGSNRLKMLGFGTEKIEDDLALLL
PEVKIARMDFDSTRNKNSYQQLINDFEQRKIDVLIGTQMVAKGLDFDHVGLVGILDADSL
LNKTDFRAFERSFQLMSQVAGRAGRRNKRGKVIIQTGNPDHWVIQKVIEHNYNDFAVNEL
VERRNFHYPPFYKLIIFTIKHKDLNLVNEAADHFGKLLKGVFHERVIGPEFPAIKRIQNY
YLKEIMLKIEVSAPQQKVKERLHELTDQFFSVPRFKPVRLINDIDPA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgccaaacgctttttgttgatgtcatcattccgatagcactgagccaggaa
ttcacctaccgtgttcccttcgaactcaacgatgagctgaaacctcttgtacgtgtgatt
gttccttttggaaaaggaaaattgtatactgccctggttacgcgtattcacgaagaagtg
ccaaccgtttaccaggcaaaatacattgaacatgtattagatgacaccccgttgatcaca
ccggttcaataccgattctggaaatggatttcgacctattacatggcaccgatcggcgat
gtgatgaatgcagctttgccagcaaacttcaagctggcgagcgaaacaaaaattgttctt
catcctgattttgatgaaaaagcaaccacactcgacgaccgtgaatttctgatcgtagaa
gcgttgaccgtgcaggacacacttgatctgagagaaatttctgaaatcgtgggtatcaaa
accatacaaccgattatcaaacggatgatcgagcgcaagatcgtattatcaaaagaagaa
gtcaacgataaattcactcccaaaaccggtttgtttgttgttttggaagacagctatgcc
gacgaagaacaactcaatttcctgctgggcgagatcggtgcaaaaaaatcgaacgccaaa
caggaacaggtgatcttaacactgttgcagtcaggaggttttgaaaacaacatggcagtt
ccggtacttcgccgcgaccttgaagaaaaaggctgctctctttctgccatcaatactctc
gaaaaaagaggtgttttgcgcatcgagcggcgggaaatatcacgtctcggagcaaatgat
gcttcggcattttcatttcccgtgctttcggtgccacaaaccaaagcgctggacgagatt
tacgcacaattcgaacataaaaacacggttctacttcatggaattacgggttccggaaaa
actgaaatctatatacatcttatccaggaagcgctaaatcaggggaaacaagttttgtat
cttgttcctgaaattgctttgacaacccagttgatccaacgcttagcggcttatttcggt
cagcagatcggtgtatatcattcacggttcaacgccaacgaacgggttgagatttggcag
aaagtacttgaaaataatctgcagcaattcaggatcgtaatcggggcacgttcttcggtt
ttccttcctttcagggaattgggactcgttattgttgacgaagagcacgaaaactcattt
aaacagcacgatccttcgccgcgttacaacggaagagatgccgccatcgtgcttgccggt
ttgttcaaagcgaaaaccgtgttgggctcggccactccggccattgaatcgtatcagaac
gtcagagaagaaaaatacggttacgtggaattgaacgagcgtttttcgtccgttaaattg
cccgaaatttgttgtgcggacatgaaaaaagaacgcatcaacaaaaccgttcagggacat
ttttcgcgttttttactggaagaaatgaccgctgcgctcgaacgcaatgagcaaatcatt
cttttccagaaccgcagaggttacacaccaatctgggcctgtgaaatgtgcggttacaat
cccaattgcaagaactgcgacactacactgacttatcataaacaaacaaacctgctgaag
tgtcatcactgcagttatcatacggctccgatcggaacctgtccggcatgtggcagtaac
cgcctgaaaatgcttggtttcggtaccgaaaaaatcgaagatgatctggcattattgctt
cccgaagtgaaaattgcacggatggactttgattcgacccgcaacaaaaacagctaccaa
caattgatcaatgattttgaacaacggaaaatagacgtattgataggcacgcaaatggtc
gccaaagggcttgattttgatcatgtcggattggttggaatcctcgatgccgattcacta
ctgaacaaaaccgatttccgggcatttgagcgttcttttcagttgatgagccaggttgca
ggtcgcgcaggaagacgcaacaaacgtgggaaagtgatcattcaaacgggaaatcccgac
cattgggtgatccaaaaagtcattgagcacaattacaacgattttgcggtaaacgaattg
gtggaacgacgaaattttcattatccgccgttctacaaactcattattttcacgattaaa
cacaaagatctgaatttggtcaacgaagccgccgatcacttcggaaaattgcttaaggga
gtgtttcacgaacgcgttatcggtcctgaatttccggcaatcaaacgcattcagaattat
tatttaaaagaaatcatgctgaaaattgaagtgtcggcacctcagcaaaaagtaaaggaa
cgccttcatgaattaacggatcaattctttagcgttcctcgattcaaacctgttcgactt
atcaacgatatcgatcccgcttaa
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