Candidatus Fluviicola riflensis: CHH17_07775
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Entry
CHH17_07775 CDS
T05019
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flu03032
]
CHH17_07775
03036 Chromosome and associated proteins [BR:
flu03036
]
CHH17_07775
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_07775
DNA replication proteins [BR:
flu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CHH17_07775
Chromosome and associated proteins [BR:
flu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CHH17_07775
DNA repair and recombination proteins [BR:
flu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CHH17_07775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Cdc6_lid
Motif
Other DBs
NCBI-ProteinID:
ASS50931
LinkDB
All DBs
Position
1872653..1872925
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELIDAIAAEAGLSKADAKKALDAFVSATSSALKGGDRLSLVGFGSFSVSKREARTG
RNPQTGKEIQIAAKNVVKFKAGADLEGSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagaattgattgatgctattgctgcagaagcaggattgtcaaaagcagat
gctaagaaagcattggatgcattcgtaagcgcaacttcaagtgcattgaaaggtggagac
cgtttatctttagtaggtttcggttcattctcagtttcaaagcgtgaagctagaactggt
cgtaacccacaaacaggtaaagaaatccaaattgcagctaaaaatgttgtgaaatttaaa
gctggtgctgatcttgaaggatctgttaactaa
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