Candidatus Fluviicola riflensis: CHH17_08255
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Entry
CHH17_08255 CDS
T05019
Name
(GenBank) hypothetical protein
KO
K03572
DNA mismatch repair protein MutL
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CHH17_08255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_08255
DNA repair and recombination proteins [BR:
flu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
CHH17_08255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ASS48724
LinkDB
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Position
complement(1962407..1964248)
Genome browser
AA seq
613 aa
AA seq
DB search
MSDLIRLLPDHIANQIAAGEVVQRPASVVKELIENSIDAGATKIEVFVKDAGRTLIQIVD
NGKGMSPLDSRMCFERHATSKIKHADDLFALTTKGFRGEALASVAAIAHVTLKTRRETDE
LGIELCIEGSTIVKQEPVQCAVGASFEVRNLFYNVPARRNFLKSDNVELKHVLDEFERVA
LAHADLSFRLVHNDQEIYHLLPGPMRKRIVDVFGKHYNDKLVPVTESTDIVRIEGFVGKP
EAARKSRGEQFFFVNNRFFRDTYFNHAVNSAFEQLLPGKSFPSYFLFLEIDPKQIDVNVH
PTKTEIKFEEDKAIYSILKSAIRLGLGKFNISPTLDFDRESEFDLPLSFLGTPAVEPTIR
VDKTYNPFDPPKPAASSSSKSFTNAMNNVGFGQSPAREKQPWEHFWNTTDDDLPELEPDA
EQTTLSINDTPTGPFLIKGTFIVAAIQEGLLLIHFRRAQERLLYEEMMRGFYVAPLASQQ
LLFPMEKQCSKQEKLSWEEHQVTLQRIGFSWEWKDELLLLTGIPDIISESTVLQCVDKVL
EQLQQGTLDKGEIAHTVLSQLAFAGSMHLKLNPDQTSLNDFVNRLFEQQEHQFTPGGKRI
LNTISNESMIQLF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctcattcgtttacttccggatcatatcgctaaccagattgctgcaggtgag
gtcgttcaacgtcctgcctctgtggtgaaggaactgatcgaaaacagtatcgatgccggc
gcaacgaaaattgaggtttttgtgaaagatgccggccgcacgctgatccagatcgtggac
aacggaaaaggaatgtcgccgctcgattcacgcatgtgcttcgaacgccacgcaaccagt
aaaatcaagcatgccgacgatttatttgccttgacgaccaaaggtttcagaggcgaagca
ttggcttccgtagctgcgattgcgcatgtaacactgaaaacacgtcgtgaaaccgatgaa
ctcggcattgaattgtgcattgaaggtagtacgattgtgaaacaggaacccgtgcaatgc
gccgtgggcgcttcgttcgaagttcgtaacttgttttacaacgtaccggcacgacgtaat
ttcctgaaatcggacaatgtggaactgaaacacgtattggacgagtttgaacgtgttgct
ttggcgcatgccgacctcagttttcgtttggtacacaacgaccaggaaatctaccattta
cttcccggccccatgcgcaaacggattgtggatgtattcgggaaacattacaacgataaa
ttggttcctgttactgaaagtaccgacattgttcggattgaaggatttgtaggaaaaccg
gaagctgcccggaaatcgcgcggtgaacagtttttctttgtcaacaaccgctttttcagg
gatacttactttaatcacgccgtgaattcggcttttgaacaattgcttccggggaaatcg
tttccaagctatttcctgtttttggagatcgatccgaaacaaatagatgtcaacgttcat
cctaccaaaacagaaatcaagtttgaggaagacaaagcgatttattccatcctgaaaagc
gctattcgactcggattgggtaaattcaatatttctccgacgctcgatttcgaccgtgaa
agtgagtttgatttaccgctttcttttttgggaactccggcagtggaaccaacaatcagg
gttgataaaacgtacaatccgttcgatccgccgaaacccgcggccagttcttcgtcaaaa
tcgttcacaaatgccatgaacaatgttggttttggacagtcaccagccagggaaaaacaa
ccatgggaacatttctggaacacgaccgatgacgatcttcctgaattggaacccgacgct
gaacaaacgactctttctataaacgatacaccaaccggaccattcctgatcaaaggaacc
ttcattgttgcagcgattcaggaaggtttattgctcattcacttccgcagagcgcaggaa
cgtttgctgtatgaagaaatgatgcgcggtttttacgtggctccgctcgcttcacagcaa
ttattattccctatggaaaaacagtgttcgaagcaggaaaagctttcgtgggaagaacac
caggtgacgttgcagcgcatcggtttttcgtgggaatggaaagatgaactattgctgttg
accggaattccggatattatttccgaatcgaccgttttgcaatgcgtggataaagtactg
gaacagctgcagcaaggtacgctggataaaggcgagattgctcacacagtattatcgcaa
ctggcatttgcgggaagtatgcatttgaaactcaatccggaccaaacctccttgaacgat
ttcgtaaaccgtttgtttgaacaacaggaacaccagttcacaccgggcggaaaacgcatt
ttaaatacgattagtaacgaatctatgatccaactcttttaa
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