Candidatus Fluviicola riflensis: CHH17_08575
Help
Entry
CHH17_08575 CDS
T05019
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00280
Valine, leucine and isoleucine degradation
flu00650
Butanoate metabolism
flu00907
Pinene, camphor and geraniol degradation
flu01100
Metabolic pathways
flu01120
Microbial metabolism in diverse environments
flu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CHH17_08575
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CHH17_08575
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CHH17_08575
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CHH17_08575
Enzymes [BR:
flu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
CHH17_08575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
SAM_PNT
Motif
Other DBs
NCBI-ProteinID:
ASS48781
LinkDB
All DBs
Position
2035958..2036824
Genome browser
AA seq
288 aa
AA seq
DB search
MKTATERVFITECPRDAMQGIHDWIPTDLKVAYINQLLQCGFDRLDCGSFVSPKAIPQLK
DTREVLDRLDDKGTTKLLTIVANERGAEEAIQFDQIDFLGYPFSISETFQRRNTNASIEE
SLKRVEVIHNLCVKSGKSLVLYLSMGFGNPYGDEWNAELVMNWSKRLYDTFSINELALSD
TIGAATPALVEQLFMAIIPELPGVKLGAHLHTLPQNAQVLVKAAYDGGCRYFDGAIKGYG
GCPMAADDLTGNMPTEQMLAYFSQQGIETGILQPAFEQAIMKSSSVFL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcgaccgaaagggtgtttatcaccgaatgtccgcgagatgcgatgcagggt
attcatgattggattccgactgatctgaaggttgcatacatcaatcagctgcttcaatgc
ggtttcgaccggttggattgtggtagctttgtttcaccgaaagctattccccagctcaaa
gataccagggaagtactagatcgtttggatgataaaggaactactaaattgctgaccatc
gttgcaaatgaacgcggtgctgaagaagctattcagtttgatcagattgactttctgggg
tatcctttctcgatttccgaaacctttcagcgacgcaataccaatgcttcaattgaagaa
tcacttaagcgggttgaagtgattcataacctgtgtgttaagtctggtaaatcattggtt
ctttatctttctatgggattcggaaacccgtatggtgatgagtggaatgcagaactggta
atgaattggagcaaacgtttatacgatactttttcaattaacgaactggcgttatcggat
acgataggcgcggcaactccggcattggtagaacaattattcatggcaattatccccgaa
ttacccggggtgaaattaggagcgcatttgcacacattaccacaaaatgcccaggttttg
gtaaaagcagcatatgatggtggttgtcgttattttgacggagcgattaaaggttatgga
ggctgcccgatggcggcagatgatttaacaggaaatatgccgactgaacaaatgcttgct
tactttagtcagcagggaatagaaacaggaatcctgcaacctgcattcgaacaggcaata
atgaaaagcagttctgtttttctataa
DBGET
integrated database retrieval system