Candidatus Fluviicola riflensis: CHH17_09730
Help
Entry
CHH17_09730 CDS
T05019
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flu03032
]
CHH17_09730
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_09730
Enzymes [BR:
flu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CHH17_09730
DNA replication proteins [BR:
flu03032
]
Prokaryotic type
DNA Topoisomerases
CHH17_09730
DNA repair and recombination proteins [BR:
flu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHH17_09730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ASS49003
LinkDB
All DBs
Position
2287212..2289782
Genome browser
AA seq
856 aa
AA seq
DB search
MADGERIIQINIEDEMKSAYIDYSMSVIVSRALPDVRDGFKPVHRRVLYGMQDLGVYSNR
PHKKSARIVGEVLGKYHPHGDSSVYDTMVRMAQEWSLRYPLVDGQGNFGSVDGDSPAAMR
YTEARLRKIAEEMLDDLEKDTVDFQPNFDDSLEEPSVLPSKIPNLLINGSSGIAVGMATN
MAPHNLTEVVDGIIAYIDDKDIEPEALLQFVKAPDFPTGGIIYGVDGAREALLTGRGRIV
IRAKAEIEEVGGREQIIVTEIPYQVNKADMIKKTAELVNDKKIEGISDIRDESDRNGMRI
VYELKRDAIPNVVLNKLYKYTSLQNSFSINNICLVDGRPRQLNLKEMIGYFVAFRHEVVV
RRTKFDLRKAEERAHILEGLVIASDNIDEVIAIIRGSQSPEEAREKLMTRFGLSDLQSRA
IVEMRLRQLTGLEQDKLRAEYADLMALITDLKDILDREERRMQIIKDELIYIRDKYGDAR
RSRIEYSASEMKIEDLIPDDEVVITISHAGYIKRTSLNEYKVQSRGGMGSKGSTTRDKDF
LEHLFVATNHNYLLIFTEKGRCFWMRIFEIPEGNKTAKGRAIQNLLNIEQDDKIKAYVKV
MDLTDKEYVENNFIVMCTKQGIIKKTSLEAYSRPRANGINAITIRENDELLEARLTDGTN
EMVLATKAGRAIRFNEGKVRPMGRNASGVRAVTLQSDADEVVGMICVKDNAETILVVSEK
GYGKRSYLNDPEDGEPVYRITNRGGKGVKTINVTDKTGPLMAIKTVADEDDLMIITKAGI
AIRMHIDQLRVMGRAAQGVRLINLKGNAEIAAVARVPRSDEEDEMLDEDGNPIAPTTDEN
PEGETDAAPAEENSEE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggagaaagaataatccagattaacatcgaagatgaaatgaaatcggcgtac
atcgattattcgatgtcggtaattgtatcacgtgcacttcctgatgtgcgtgacggattc
aaacctgttcaccgccgtgtattatacggtatgcaggatttgggtgtttactctaatcgt
ccgcataaaaagtccgctcgtatcgttggtgaggttttagggaagtatcacccgcatggt
gacagttccgtgtatgacacaatggttcgtatggctcaggagtggtcgcttcgctaccca
ttggtagacggacagggaaacttcggatcggttgacggtgatagtccggcagcaatgcgt
tatacggaagcccgtttgcgtaagatcgccgaagaaatgctcgatgacctggaaaaagac
accgttgattttcaaccgaatttcgatgactctttggaagaaccttccgtgcttccttcc
aaaataccgaatttgcttataaacggttcaagcggtattgcggtaggtatggcaacaaat
atggcacctcacaaccttacagaggtagttgatggtatcattgcgtatatcgacgataaa
gacattgaacccgaagcgttgctgcaattcgtgaaagcacctgacttcccaaccggcggt
attatatatggtgtagacggagcgcgtgaagcgttgttgacaggccgtggcagaatcgtt
atacgtgccaaggcggaaatcgaagaagttggtggtcgtgaacaaatcattgtgaccgag
attccttaccaggtcaacaaagcggatatgatcaagaaaaccgctgagttggtcaatgac
aagaaaatcgaaggtatttcagacatccgcgacgaatcggatagaaacggtatgcgaatc
gtttacgaattaaaacgtgatgcgattccgaatgtggttttgaacaaattgtacaagtac
acttcgcttcagaattcattctcgatcaataacatttgtttggttgacggacgtccgcgt
cagttgaacctcaaagaaatgatcggttatttcgtggctttccgtcatgaagtggttgta
cgcagaacaaaattcgacttacgtaaagcagaagagcgtgcacatatcttagaaggattg
gtgattgcttccgacaacatcgatgaagtaattgcgattatccgcggatctcaaagtccg
gaagaagcacgtgaaaaattaatgacacgcttcggactttccgatttgcaatcgcgtgcc
attgttgaaatgcgtttgcgtcagttaaccggacttgaacaagacaagttacgtgctgaa
tatgctgacttaatggcattgatcaccgatttgaaagatatccttgatcgtgaggaacga
cgtatgcagatcatcaaagacgaattgatctacattcgcgataaatacggtgatgcacgt
cgttcacgtatcgaatactcggcttcagaaatgaagattgaagatttgatcccggatgat
gaggtggtaattaccatttcacacgccggttatattaaacgtacaagcttaaacgaatac
aaagttcaaagtcgcggcggaatgggatcgaaaggttctaccacgcgtgacaaagacttc
ctggagcacttgtttgttgctaccaatcacaattacctgttgatctttaccgaaaaagga
cgttgcttctggatgcggatttttgaaattccggaaggaaacaaaactgccaaaggacgt
gcaatccaaaatctgctcaacatcgaacaggacgataagatcaaggcatatgtgaaagtg
atggatttgaccgataaagaatacgtcgaaaacaacttcatcgtgatgtgtaccaaacaa
ggtatcattaagaaaacgtcgctggaagcttattcacgtccgcgtgccaatggtatcaac
gcgatcacgatccgtgaaaatgacgagttgttagaagcgcgtttgaccgacggtaccaac
gaaatggtattggcaaccaaggctggtagagcgattcgtttcaacgaaggaaaagtgcgt
ccgatgggaagaaatgcttcgggagtacgtgcggtgacacttcaatcagatgcagatgag
gtagttggaatgatctgtgtgaaagacaacgcagaaactattttggttgtttctgaaaaa
ggatacggaaaacgttcttacttaaatgatccggaagatggtgagcctgtttaccgaatc
acgaatcgtggaggaaaaggtgtaaaaaccatcaatgtaacggataaaaccgggccgttg
atggcaattaaaaccgtagctgatgaagacgatttgatgattatcactaaagcgggaatt
gccattcgtatgcacatcgaccaattgcgtgtaatgggtagagccgctcagggtgttcgt
ttgatcaacctgaaaggaaacgccgaaattgcagccgtggctcgtgttccgcgtagcgat
gaggaagatgaaatgctcgacgaagacggaaatccaattgcgcctactacagatgaaaat
ccggagggtgaaacggatgcagcaccagctgaagaaaattcagaagaatag
DBGET
integrated database retrieval system
