Candidatus Fluviicola riflensis: CHH17_09970
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Entry
CHH17_09970 CDS
T05019
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu03030
DNA replication
flu03430
Mismatch repair
flu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHH17_09970
03430 Mismatch repair
CHH17_09970
03440 Homologous recombination
CHH17_09970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flu03032
]
CHH17_09970
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_09970
Enzymes [BR:
flu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHH17_09970
DNA replication proteins [BR:
flu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHH17_09970
DNA repair and recombination proteins [BR:
flu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHH17_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
DNA_pol3_gamma3
AAA_22
AAA_30
RCF1-5-like_lid
AAA_5
Rad17
TIP49
AAA_19
AAA_14
DNA_pol3_delta_C
AAA_18
Mg_chelatase
VapE-like_dom
QueC
AAA_2
AAA_24
SRP54
AAA_assoc_2
RNA_helicase
AAA_16
AAA_7
GNAT_acetyltr_2
nSTAND3
RsgA_GTPase
PIF1
Motif
Other DBs
NCBI-ProteinID:
ASS49048
LinkDB
All DBs
Position
complement(2351487..2352602)
Genome browser
AA seq
371 aa
AA seq
DB search
MSEFVVSARKYRPQTFDTVVGQKSITTTLKSAIKNDHLAQAFLFCGSRGVGKTTTARILA
KTINCFNKTEQVEACDQCDSCTSFNSGASLNVYELDAASNNSVDDIRGLIDQVRIAPQLG
SHKVYIIDEVHMLSTAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIFDFQRI
KVKDIADHLANVATKEAISADPDALHLIAQKADGALRDALSIFDQIVSFAGSTVTHKSVI
DNLNILDHDYYFKVVENALNEDIPANLLLFNDVMEKGFDGHHFIVGLADHFRNLLVCKDP
RTVNLLEVGEVTEKGFLDQSKKVDANLAVRALGVLSKTDVDYKSSKNQRLLVEMALMQLC
SIKSELEKKNP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatttgttgtttctgcccgaaaatacagaccacaaacctttgatacggttgtg
gggcaaaaatccattactactacgctcaaaagcgccatcaagaacgaccatttagctcag
gcttttttgttctgcggttcgcgtggagtagggaaaacaacaacggcacgaattcttgcc
aaaacgatcaattgtttcaataaaaccgaacaggttgaagcctgcgatcagtgcgatagc
tgtacatcgtttaattccggagcttcgctgaacgtttatgaattggatgcggcttcgaat
aactcggttgacgatatccgcggtttgatcgatcaggtgcgcattgcgccacaattggga
agccacaaggtgtatatcatcgatgaggtgcacatgttgtcgacagctgcttttaatgcg
ttcttgaaaacattggaagaaccgccggcacacgccattttcattttggcaactaccgaa
aaacacaagattattcctacgattttgtcacgctgccagatctttgatttccagcggatc
aaggtcaaagatattgccgatcatttagcaaatgtagcaaccaaagaagctatcagtgcc
gatccggacgctctgcacttaattgctcaaaaagcagatggtgcgttgcgcgatgctctt
tctatttttgatcagatcgtcagtttcgcgggttcaacagttacccacaaatcggtgatc
gacaaccttaacattcttgatcacgattattatttcaaggtagtggaaaacgccttgaat
gaagatattcccgccaacttgttgttattcaatgatgtgatggaaaaaggatttgacgga
caccacttcattgtaggactagcggatcatttccgtaacctgttggtgtgtaaggatccg
cggacggtaaacctgctcgaagtaggcgaagtcaccgaaaaaggatttttggaccagtca
aaaaaggtagacgcaaacctggccgtaagagctttgggagtgctgagcaaaaccgatgtc
gactacaaatccagcaagaaccagcgattactcgtagaaatggctctcatgcaattgtgt
tcgattaaaagtgagctcgaaaaaaaaaatccctaa
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