Candidatus Fluviicola riflensis: CHH17_11260
Help
Entry
CHH17_11260 CDS
T05019
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00300
Lysine biosynthesis
flu00470
D-Amino acid metabolism
flu01100
Metabolic pathways
flu01110
Biosynthesis of secondary metabolites
flu01120
Microbial metabolism in diverse environments
flu01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CHH17_11260 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CHH17_11260 (lysA)
Enzymes [BR:
flu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CHH17_11260 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ASS49297
LinkDB
All DBs
Position
complement(2613740..2614960)
Genome browser
AA seq
406 aa
AA seq
DB search
MNTSFLCEVAQTFGTPVYVYDEAKIVENYQRLKRAFGKQDVKLHYALKALSNSAILKTLR
NQGAGLDAVSIEEVFLGLRAGFEAHEIMYTPNGVAFEEICEAVELGVMVNIDNLSILEKF
GARYGANVPVCVRINPHIMAGGHANISVGHIDSKFGISIHQLRHITRLVAHYNLNIVGLH
MHTGSDIIDADVFIQGAELLYQAAESFPNLTFMDFGSGFKVAYKEGDIVTPIEQIGKKIG
ASFHAFCKEYGRDLELWFEPGKFLVSESGTLLVSVNVVKQTTSTVFIGVNSGQNHLIRPM
FYNAYHHIENCSNINGEEKLYSVVGYICETDTFGYDRLISEVREGDVLAIRNAGAYGFSM
SNQYNARLRPAEVLVRDGKAHLIRRRETLEDIYRNEVEIVEVEQLV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatcctttctctgtgaagttgcccaaacgtttggcactccggtttatgtttat
gacgaagcaaaaattgttgaaaattaccaacggttaaaacgcgctttcggtaaacaggat
gtaaagttacattacgctttaaaagcgctcagtaatagtgcgattttgaaaacattgcgt
aatcagggagccggattggatgctgtttcgattgaagaagtattccttggattgagagct
ggatttgaagcacacgaaatcatgtatacacccaatggagttgcttttgaagaaatttgc
gaagcggttgaactgggcgtgatggtgaatatcgataacctgtcgatcctggaaaaattc
ggagcgcgctacggagccaatgtaccggtttgtgttcgtatcaatccacatatcatggcg
ggtggacatgcaaatatttcggttggtcacatcgattccaaatttgggatctccattcat
cagttacgtcacattacccgtttagtggcacattataacctcaatatcgttggattgcac
atgcataccggaagcgatatcatagatgccgatgtatttattcagggtgccgaattgctt
taccaggcggcagaatcgtttccgaatcttacgttcatggatttcggaagtggatttaaa
gtcgcttacaaagaaggagatatcgtgactccaatagaacaaataggcaagaaaatcggt
gcttcgtttcatgcgttttgcaaggaatacggtcgtgatctggaattgtggtttgaaccg
ggcaaatttttagtgagcgaaagtggaaccttacttgtttcggtgaatgtggtgaaacaa
acgacttcaactgtatttattggtgtgaacagcggtcaaaatcacctgattcgcccgatg
ttctataacgcgtatcaccacattgaaaattgttccaatatcaatggagaggaaaaactc
tattccgtggtgggctatatttgtgaaaccgacacgtttggttatgatcgtttgatcagc
gaggtacgcgagggtgatgtgctggctattcgcaatgcgggcgcttacggtttcagtatg
agtaaccagtacaatgcgcgcttacgtccggcggaagtattggtacgtgatggaaaagct
cacttgattcgtcgacgcgagacgttggaggatatttacaggaatgaggtggaaatcgtg
gaagtggaacaattggtataa
DBGET
integrated database retrieval system