Candidatus Fluviicola riflensis: CHH17_11985
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Entry
CHH17_11985 CDS
T05019
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00061
Fatty acid biosynthesis
flu00540
Lipopolysaccharide biosynthesis
flu01100
Metabolic pathways
flu01212
Fatty acid metabolism
Module
flu_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CHH17_11985
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CHH17_11985
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
flu01005
]
CHH17_11985
01004 Lipid biosynthesis proteins [BR:
flu01004
]
CHH17_11985
Enzymes [BR:
flu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
CHH17_11985
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
CHH17_11985
Lipopolysaccharide biosynthesis proteins [BR:
flu01005
]
Lipid A
CHH17_11985
Lipid biosynthesis proteins [BR:
flu01004
]
Fatty acid synthase
Component type
CHH17_11985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
ApeP-like
Motif
Other DBs
NCBI-ProteinID:
ASS49436
LinkDB
All DBs
Position
complement(2806807..2808207)
Genome browser
AA seq
466 aa
AA seq
DB search
MSEKQRTLKEAIVFKGVGLHTGEPVTMEVCPAPDNHGYKFQRIDLENQPIIKADADLVVA
TDRGTTLESQGARVYTTEHVLAALYGMEVDNALIKIDGPEIPIMDGSSLPFVKEIIRVGY
QEQEAEREYFVLDENVKWEDTEKGIEFLAVPDNGYRITVMVDYNSPALGTQHAAIYNIDA
FEKEISPCRTFCFLGELEFLAKNNLIKGGDLDNAIVLVERNDVSQEELNRLAKLLGKENL
TVNYDGIGVLNSLKLQFENEPARHKLLDIVGDLALVGKPIKAHILGARPGHSGNVRFAKV
LKEQIKKQEKAARTFDVTADPLYNINDIERMLPHRYPFLLVDKVMYITDDTIVGVKNITM
NEPIFTGHFPGNPVFPGVLQIEAMAQVGGIFSLSKVEDPHLYSTYFMKIDNVKFKQKVLP
GDTVVFELKLLSPMRRGLVHMGGVAYVNGKPVMEAEMLAQVIKDKE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaagcaacgaaccttaaaggaagccattgtttttaaaggagttggactccac
accggagagcctgtaacaatggaagtctgtccggcaccggataatcacggttacaaattc
cagcgtatagatttggaaaatcaaccgatcatcaaagccgatgccgatttggtagttgca
actgatcgcggaacaaccttggaatctcagggggcccgcgtctataccacagagcacgtt
ttggcggcgctttacggtatggaagtcgataacgcactcattaaaattgatggccctgaa
attccgattatggatggtagctcgcttcccttcgtaaaagaaatcattcgtgtcggttac
caggaacaggaagcagagagagaatattttgtcctcgatgaaaacgtaaagtgggaagat
accgaaaaaggaatcgagtttttggccgttcctgataatggttaccgcattaccgtaatg
gtcgattacaactcaccggcattgggcacgcaacatgcagccatctacaacatcgatgca
tttgagaaagaaatttcaccctgccgtacattctgtttccttggcgaattggaattcctc
gcaaaaaacaacctgattaaaggtggtgatttggacaatgcgattgttttggtggaacgc
aacgacgtgagccaggaagaactcaaccgccttgcgaaattgctcggtaaagaaaattta
accgttaattacgacggaatcggtgtgctgaacagtcttaaactgcagtttgaaaacgaa
cccgcccgtcataaactattggatatcgttggtgatttagcccttgtgggtaaaccgatc
aaagcacatattttgggagctcgtccgggacattccggcaacgtacgtttcgcaaaagtg
ctaaaagaacaaatcaagaaacaggaaaaagcagcaagaacgtttgatgtaacggcagat
ccgctctacaatatcaacgatatcgagcgcatgcttcctcaccgttacccgttcctgttg
gttgataaagtaatgtacattacagacgatactattgtcggggtgaaaaacattaccatg
aatgaacctatatttacaggacatttccctggaaatccggttttccccggagtacttcaa
attgaagcaatggctcaggtcggtggaatcttttcactgagtaaagtagaagacccgcat
ttgtattcgacttacttcatgaaaatcgacaatgtgaaattcaagcaaaaagtattgcct
ggcgatacggtcgtgtttgaattgaaattattgtcacctatgcgacgtggacttgttcac
atgggaggtgttgcttacgtaaacggcaaaccggttatggaagcggaaatgttggcacaa
gtgattaaagacaaagaataa
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