Candidatus Fluviicola riflensis: CHH17_12400
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Entry
CHH17_12400 CDS
T05019
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flu03032
]
CHH17_12400
03036 Chromosome and associated proteins [BR:
flu03036
]
CHH17_12400
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_12400
DNA replication proteins [BR:
flu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CHH17_12400
Chromosome and associated proteins [BR:
flu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CHH17_12400
DNA repair and recombination proteins [BR:
flu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CHH17_12400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
PqqD
DUF937
HU-CCDC81_bac_1
RuBisCO_activase_AAA_helical
DUF4777
UQCC3
dnstrm_HI1420
GlnD_UR_UTase
Motif
Other DBs
NCBI-ProteinID:
ASS50960
LinkDB
All DBs
Position
complement(2882457..2882747)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKADIVAEIAEETGLERNEVQKAVEAFMTSIKSSLAKNENVYLRGFGSFVVKVRAEKTG
RNISKNTTIIIPAHNIPSFKPAKTFVEEVKNKVVVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagatattgttgctgaaatcgcagaggagacagggttggaaagaaacgaa
gtgcagaaagctgttgaagcattcatgacttccattaaaagttctcttgctaaaaatgag
aatgtttatttgagaggtttcggaagcttcgtagtgaaggtgagagcggagaaaacaggt
cgtaatatttctaaaaataccacgatcattattccagcacacaatattccttctttcaaa
ccggcaaaaacgtttgttgaggaagtgaaaaataaggtagtagtgaaataa
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