Candidatus Fluviicola riflensis: CHH17_12405
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Entry
CHH17_12405 CDS
T05019
Symbol
mutY
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHH17_12405 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_12405 (mutY)
Enzymes [BR:
flu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
CHH17_12405 (mutY)
DNA repair and recombination proteins [BR:
flu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHH17_12405 (mutY)
Prokaryotic type
CHH17_12405 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ASS49515
LinkDB
All DBs
Position
2882855..2883883
Genome browser
AA seq
342 aa
AA seq
DB search
MADFVLQITEWYRLNARTLPWRETKNAYFIWLSEVILQQTRVDQGMKYYLSFVTYFPTVE
QLAHADEEQVLKLWQGLGYYSRARNLHKTAQQVTEQFNGAFPASYEQLLSLKGVGPYTAA
AIASFAFDLPHAVVDGNVYRILSRYFGIDLPIDSTEGKKTFQELASELIPVSDPALFNQA
VMEFGALQCTPANPSCETCVLVENCASGKNERWKERPVKSKKTAVRDRFFHYFHIEHEGK
IAVKKRVDKDVWQHLYEFPMIETLSEELLETDLAQFPVRDMDFATVSSSKHILSHQRIYA
TFHRLTVTKPNDLTHFEANDISSFHELPIHRLMHRYVEKYMD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttgttctacaaattaccgaatggtacagactaaatgctcggacgcttccc
tggagggaaacaaaaaatgcctatttcatttggttgtcggaagtaattttgcaacaaacg
agggtcgatcaggggatgaaatactatttgtctttcgttacctattttccaacggttgaa
caactcgctcatgccgatgaagaacaggttttgaagctgtggcaagggctcggttattat
tcccgtgcccgcaacctgcacaaaacagctcaacaggttacggaacaatttaacggtgct
tttcccgcttcttatgagcaattgctttcactgaaaggcgtcggcccctatactgccgcc
gcaatcgcttcttttgcctttgatttgccgcacgctgtggtcgatggaaatgtttaccgc
attctgagccgctatttcgggatcgatttaccgatcgactcaaccgaaggaaaaaaaaca
ttccaggaattggcttcagaattgattccggtgagtgatccggcgcttttcaatcaagcg
gtaatggaattcggagctttgcaatgcacgcctgccaatccttcctgcgaaacctgtgtg
ttagtagaaaattgtgcttccggaaagaatgaacgatggaaagagcgccctgtcaaatcg
aaaaaaacagcggttcgcgatcgctttttccattatttccacatcgaacatgaaggaaaa
atagctgtcaaaaaacgcgtggataaagacgtttggcagcatttgtatgaattcccgatg
attgaaacactttctgaagaattactggaaacggaccttgcacaatttccggtccgtgat
atggatttcgcaacggtttcttcgtcgaaacacattttgagccaccagcggatttacgca
acgtttcatcggctaactgttacaaaaccgaatgatttaacccattttgaagcaaacgac
attagttcttttcatgaattaccgattcatcgtttgatgcacagatatgttgaaaagtac
atggattaa
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