Candidatus Fluviicola riflensis: CHH17_13565
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Entry
CHH17_13565 CDS
T05019
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
flu03009
]
CHH17_13565 (rimO)
Enzymes [BR:
flu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CHH17_13565 (rimO)
Ribosome biogenesis [BR:
flu03009
]
Prokaryotic type
ribosomal protein modification factors
CHH17_13565 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
TRAM_2
Radical_SAM
CLP1_P
Tht1
Motif
Other DBs
NCBI-ProteinID:
ASS50967
LinkDB
All DBs
Position
complement(3150706..3152019)
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AA seq
437 aa
AA seq
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MKTKTLRKNKVNVVTLGCAKNTFDSEVLMAQLKANKFDVEHESTKDDASIVIINTCGFID
NAKQESIDTILRYADAKNEGLVDKVYVTGCLSQRYKDDLEIEIPEVDAFFGTRDLPRLLK
TLKADYKHELVGERLLTTPAHYAYFKIAEGCDRPCSFCAIPLMRGKHVSTPMDQLLTSAK
SLAAGGVKEILLIAQDLTYYGLDIYKKRNLAELVDRLSDVEGIDWIRLHYAFPSGFPMDV
LDVMNNRSNVCNYLDMPLQHGSTKILQSMRRGITREKTENLVEEIRQKVPGIAMRTTLIA
GYPGETQADFDEMYSFVERTRFDRLGIFTYSHEENTHAFSLNDDVTDEVKRQRADEIMEL
QSGISYELNQKKVGNNYKVLFDRAEGDYFIGRSEFDSPEVDNEVLVKKSEGFVRIGDFAN
VQITSADHYDLYGKLID
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaacacttcgtaaaaacaaagtcaatgtagtaacacttggttgcgctaaa
aacaccttcgattccgaagtgttgatggcacaattaaaggccaacaagtttgatgtggaa
catgaatctacaaaagatgacgcgtctatcgtgatcatcaatacttgcggattcatagac
aatgccaaacaagaatccattgacaccattttgcgctacgcggatgccaaaaacgaaggt
ttggtagataaagtctacgttaccggctgtctttctcaacgttacaaagacgatttagag
atagaaattccggaggtggatgcttttttcggaacgcgagatttgccccgtttgctcaaa
acactcaaagccgattacaaacacgaattggtcggagaacgattattgacgactccagct
cattatgcctatttcaaaattgccgaaggctgtgatcgcccttgttcattttgtgccatt
ccgttgatgcgtggaaaacatgtttcaactccgatggatcaattgctgacttctgccaaa
tcgctggcggcaggtggcgtgaaggaaattcttctaattgcccaggatttgacttattac
ggactcgatatttacaaaaaacgcaacctggccgaattggttgaccgcctttccgatgtg
gaaggaatcgactggattcgcctgcattatgcattcccgtcaggtttcccgatggatgtg
ctcgacgtgatgaacaatcgttcaaacgtttgcaattacctggacatgccgttacaacac
ggttctacgaagatattacaatccatgcgccgtggaattacccgcgaaaaaacggaaaac
ctcgtagaagaaattcgccagaaagttcccggaatagcgatgcgtaccactttgatcgcc
ggttatcccggagaaacacaagccgattttgatgaaatgtacagtttcgtggaacgtaca
cgttttgaccgccttggaattttcacctattcacacgaagaaaatacccatgctttttca
ctcaatgatgatgtaacggatgaagtgaaacgccagcgggctgatgaaatcatggaattg
caatcgggaatcagctacgaattgaaccagaaaaaagtaggaaacaactacaaagtattg
tttgatcgtgcagaaggtgattattttatcggtcgttccgaattcgactcaccagaggta
gacaatgaagtccttgttaagaaatccgaaggctttgtgcgaatcggtgattttgccaac
gtgcagattacttcagccgatcactatgatttgtacggaaagcttatagactaa
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