Candidatus Fluviicola riflensis: CHH17_15220
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Entry
CHH17_15220 CDS
T05019
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHH17_15220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
ASS50052
LinkDB
All DBs
Position
complement(3532850..3537646)
Genome browser
AA seq
1598 aa
AA seq
DB search
MNRIITLLFGLFFTTLLLGQTTQSKVDYDNDSRWFWGANVGTTWSSTDVTKKHDWGWGLT
LGKSFNYNYGKPLSFDIRARYLTGKWYGQDFDSTSFAEHPNTALSSGTTDYNAAYGHSVL
NFETTVHRAALELVLHANNLRAKTGWDVTVFGGIGYTWYKTYGDAIDDKTSTIYNYDTLN
PFNADAIKGILDGDYETQLDGTSGNKYSGAWMPSVGFGIGYQVGPRFSIGLEHKSTFTLM
DNFDGFINPDGKRKNDIYHYTSAYVRFQIRDHWEGDIHEDDNSLDEVDNYNQQNNVPPTV
DFRSPATSGTTVSNPSYVIQADVKNVVSSNNVIFRQNGNYISNFSFNPSTQQFTSSVTLN
PGQNIFELTGTNDYGSDQEQTIIIYNREEQNPPIVSYQNPSTSPTTVQVQSYSLMATVLN
VTQQSQVTMTFNGQPFTGFSFNPSNNGVTASLNLQVGTNIVTTTGTNQYGTDSESTTIIY
NPAQTEQPPVVYFVDPNVNPYTTAQGTFNISANVLNVAGAQNITFKQNGSVNQNFTYNTV
SDNLQSTVVLNPGQNVFEIIGTNTAGTAQATTIIIYERQAPKPPIVTITNPASNPQETTS
PIYNLGSTVLNVTQASQISVKLNGQSVSNFNYTASNNGVTATLNLIEGSNVVVVTGTNSD
GTDSKQTVIIYRKPVTVQPPVVTYSSPNMDPFTTDQPNYTVVATVLNVANQSGVNVNVNG
SNVTNFTFNASNAVVTLPLTLIEGANVITITGTNVAGVDSEPQTIIYRKPAPVQPPVVSF
IDPAVNPTTVFNQTYDVKARVRHVASAQQIVLRINGQVSTNFTYSASSEMMTFTTGLVPG
ANIVEITGTNSAGQDQESTTIIYREPNPTLPPVVTITNPIANPHTVSIATAPITATVLNV
DGSQNIQVTVNGVPISNFTYNTGTKQLAFVMNLISGSNSLVITATNSAGQASDNRTIVYR
REIVVVPPPLVTFIHPATPGIVVNNPGYTVNAHVNNVDQANQVVVSQDGQIVSPNLWNFD
AATKNITFNTTLNAGNNVFMVTGTNATGTHSATTSIIYTIPIIVCDKPVINFTAPATGGL
VVENNSYTVVVSISNVNANQIKLVVNGAIQSPGTYTNGVYTKAVTLAEGQNSIEVTATNN
CGETKAITTITFHAPAAPCHPPVVQRVDPLQDMVVVQTETVNVKASVTNVTNVSQLSLVV
NGVSVPFNYDAAAHFVTATVNLTVVGENKVAVIASTECGKSRADWKITRQVCNAPTITLS
SSTVADGAMTYAESFGLTAAIAGVTSQNQITVTHNGQNIGFVYTAQTGVLTLDRALPLGA
SKFIITVTNNCGTNTLIHTVTRRTDPNAVPPTIQITTPSTSAPTIPFQTNQAAMTVQIAT
THVNAANQVVVTVNGAPTNFNFNAANGSISFNTNFNVGGNVITATAATPYGTATDNKTVV
YTVPVTVNPPVITLTNPERCPAAFARGNATITGTVTNISNTNQVVITFGGANTNYTSTIT
GNTLSFSFDVSIAGTTLNIPLVVTATNEAGTDVETCAISISTNTEVEQGGQGNGGQFGGG
GDTIRPRNGEGEGGSNPPPTTPVKKPAPTEPTTPVRRP
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaataattacactactctttggtctgttttttacaacacttcttctgggacaa
actacacaatcaaaagtcgattacgacaatgattcgcgttggttctggggggcaaatgtc
ggtactacgtggagttcgacggatgtgaccaaaaaacacgattggggctggggactcacc
ctcggtaaatcattcaactacaactacggtaaaccgttgagctttgatatcagagcccgt
taccttaccggtaagtggtatggtcaggatttcgattctaccagttttgcagagcatccc
aacacagcgttgagctcaggtactaccgattataatgccgcttacggacattccgtgctg
aactttgaaacaacagttcaccgcgctgcattggaattggtattacatgccaataacctg
cgtgcaaaaacaggatgggatgttaccgtttttggtggaatcggttacacatggtataaa
acttatggtgacgcgattgacgataaaacgagtaccatttataattatgacacgttaaat
ccgttcaatgcggatgccattaagggaattcttgacggtgattacgaaacacaattagac
ggaacatccggaaacaaatactcaggtgcatggatgccaagcgtaggttttggaatcggt
taccaggttggtccgcgtttttctatcggtttggaacacaaatctaccttcacattgatg
gataattttgacggattcatcaatcctgacggaaaacgcaaaaacgatatttaccactat
acaagtgcatatgtgcgtttccagatccgcgatcattgggagggcgatattcatgaagat
gataattcattagacgaagttgataactacaatcagcaaaacaatgtaccgccgactgtt
gatttccgaagtccggcaacatcaggtacaacagttagcaatccttcttatgtgatccag
gctgacgtgaaaaacgtggtaagttccaacaatgtgatcttccgccaaaacggaaactac
atttccaacttcagctttaacccgtcaacacaacagtttacatcttctgtaacgctgaac
ccgggccagaatatctttgaattgacaggaaccaacgattatggttctgaccaggagcaa
acgattattatttacaatcgcgaagagcaaaatccgccaatcgtttcttaccagaatccg
agcacaagccctacaacggttcaagttcagtcttacagtttgatggcaacggtgttgaac
gtaacacaacaaagccaggtaactatgaccttcaatggccagccgtttacaggtttcagt
ttcaatccttccaacaatggagttacagcttcattgaaccttcaggtaggaacgaacatt
gtgacaacaactggaacgaatcaatacggaacagatagtgagtcaacaaccattatctac
aaccctgcacaaaccgagcaaccgccggtagtatacttcgtagatccgaacgtaaatcct
tacacaactgcacaaggtacgtttaacatcagcgccaatgtattgaacgtagctggagca
caaaacattaccttcaaacaaaacggttcggtaaatcagaacttcacttacaatacagtg
tctgataatttacaaagcacggttgtgttgaatcctggacaaaacgtattcgagatcatc
ggtacaaacactgccggaactgcacaggcaactacgatcattatttatgagcgtcaggct
ccgaaaccgccaattgtaaccattacaaatccggcaagcaatccacaggaaactacgtcg
ccgatctataacttaggttctacggtgttgaatgtaacacaggcaagccagatctcagtg
aaattaaacggacaatctgtttcgaatttcaattacacggcttcaaacaatggtgtaaca
gctacattgaacctgattgaaggatcaaacgtggtagtggttacaggaaccaacagtgat
ggaactgattccaaacaaacggtgattatttaccgcaaaccggtaacggtacaaccgccg
gtagtgacttacagctcaccgaacatggatccttttaccacagatcaaccgaattatacg
gttgttgctactgtattgaatgtagcgaaccaaagtggtgtgaacgtaaatgtaaacggt
tcgaatgtgaccaactttaccttcaatgcttccaacgcggtggtaacattgccgctgaca
ttgatcgaaggtgcaaacgtgattaccatcacaggtacaaatgttgccggtgtggattct
gaaccgcaaacgatcatttaccgtaaaccggctccggtacaaccaccggtagtgagcttt
atcgatcctgctgtgaaccctacaacggtgttcaaccagacatacgatgtaaaagcacgt
gttcgccacgttgcaagtgcacaacaaattgtgttgcgaatcaacggccaggtttctacc
aactttacctacagtgcttcttctgaaatgatgacatttacaacaggtttggtaccggga
gcgaatatcgttgaaattacagggaccaattctgcaggccaggatcaggaatcgactacg
atcatttaccgtgagccgaatcctacattgccgccggtggtaaccattaccaacccgatt
gcaaatccgcatacggtaagcatcgcaacagcaccaatcacagcaactgtgttgaatgtt
gatggttctcagaacatccaggttaccgtaaatggagtaccgatcagcaacttcacatac
aataccggtacaaagcaactggcattcgtgatgaacctgatctcaggatcaaacagtttg
gtgatcactgctaccaattcagcgggtcaggcaagcgataaccgcacaattgtctaccgc
agagaaatcgtggttgtaccaccgccattggtgacattcattcatcctgcgactccggga
attgttgtgaacaaccctggctatactgtgaatgcacacgtgaataacgtagatcaggcg
aaccaggtagttgtttcacaagacggacaaatcgtaagccctaacttgtggaatttcgat
gccgctaccaaaaatataacgtttaacaccactcttaacgccggtaacaacgtgttcatg
gtaacaggtacaaacgctacgggtacgcacagtgcaacaacaagtattatctacaccatt
ccgataattgtgtgtgacaagcctgtcattaactttacggctcctgcaacaggtggttta
gttgttgaaaacaacagttataccgtagtcgtttctatctcgaatgtgaatgccaatcag
attaaattggtggtgaacggtgcaattcagagtccgggtacgtacacgaatggcgtttac
acaaaagcagtaacacttgctgaaggccaaaactctatcgaagtaacagcaaccaataat
tgcggtgaaaccaaagcgattacaaccattacattccacgctcctgcagcgccatgtcat
cctccggtggttcagcgggttgatcctttacaggatatggtagtggttcaaacggagaca
gtgaatgtgaaagcaagcgttaccaatgtaacgaatgtgagtcagttgagtttggtagtg
aatggtgtttcggtaccattcaattacgatgctgctgcgcactttgtaacagcaacagtt
aacttaacggttgtaggtgaaaataaggtagcagtcattgcttctacggaatgtggaaaa
tcaagagcagactggaaaatcacccgacaagtgtgtaacgctccaactattacgttgagt
tcttctacggtagctgacggagcgatgacttatgctgagtcgttcggattgacagctgcg
attgcaggagttacgtctcaaaatcagattaccgtaacgcacaacggacaaaacatcggt
tttgtttatacggcacaaaccggagtcttgacgctggatcgcgcgcttcctttgggagca
agcaagttcatcattaccgttacaaataactgtggtaccaacacgttgatccatacggta
actcgtcgtactgacccgaatgcggttcctccgacaattcagattaccacgccgtcaacg
tctgcaccaacaattccgttccaaacgaatcaggcggcgatgacagttcagattgcaacg
actcacgtaaatgctgccaaccaggtagtagtaacagtaaacggtgcaccgacgaacttt
aacttcaacgcagcaaacggtagcatctcattcaacaccaactttaatgtaggcgggaat
gtgatcacagcaactgcggctacgccatacggaacggcgactgacaacaaaacggtcgtt
tatactgttcccgtaacggtaaatcctccggtaatcacattgaccaatccggagagatgt
ccggcggcatttgcgcgtggaaatgcgaccatcacaggtacggttaccaatatttccaac
acgaaccaggtggtaattactttcggtggtgcaaacacgaattatacatcaacgattaca
ggtaatactttatcattcagcttcgatgtttcgattgctggaacaacacttaatattcca
ttggttgtaactgctaccaacgaagcaggaacagatgtagaaacgtgtgcgatcagtatt
tctaccaacacagaagttgaacaaggcggacagggtaatggcggacagtttggcggtggt
ggtgataccatcagaccgagaaacggtgaaggagaaggtggtagcaatccaccaccaaca
actccggttaaaaaaccagcaccaactgaaccgacaactccggtaagaagaccatag
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integrated database retrieval system
