Candidatus Fluviicola riflensis: CHH17_15290
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Entry
CHH17_15290 CDS
T05019
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flu03016
]
CHH17_15290 (truB)
Enzymes [BR:
flu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CHH17_15290 (truB)
Transfer RNA biogenesis [BR:
flu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHH17_15290 (truB)
Prokaryotic type
CHH17_15290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ASS50065
LinkDB
All DBs
Position
complement(3548832..3549527)
Genome browser
AA seq
231 aa
AA seq
DB search
MLTEFAQGSTILVDKPLHWTSFDAVNKLRWHLRKRLGVKKLKVGHAGTLDPLATGLLVIC
IGKHTKLIEGLTGDAKTYTGTILLGKTTPSYDLETEYNETFPTEHITVELLESVRASFIG
VQQQVPPIFSAKQVDGKRAYDLARAGKEIVLKANTIEITDFQIDSSRFPEIDFEITCSKG
TYIRSIAYDFGAKLNSGGTLIALRRTASGNNHIEASKSVEDWITFIEEAEL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgctcactgaatttgcccaaggcagcaccattctggtcgacaaaccgcttcattggact
tccttcgatgccgtaaataaattgcgctggcacttacgcaaacgtttgggtgtgaaaaaa
ctcaaagtgggtcatgccggaacgcttgatccgctggcaacaggtttgctggtaatttgc
atcgggaagcataccaagcttatcgaaggcctcacaggcgacgccaaaacctatacggga
accattttgctgggaaaaacaactccttcttacgatctcgaaacagagtacaacgaaaca
tttccaaccgaacacatcactgtcgagttactggaaagtgttcgagcttcttttattgga
gtgcaacagcaggttccgccaatcttttctgccaaacaagtcgatgggaaacgagcgtat
gacctggcccgtgccggaaaagaaattgttttaaaagccaacactatcgaaatcaccgat
tttcaaatcgacagcagccgatttccggaaattgattttgaaatcacctgcagcaaagga
acctatattcgctccattgcttacgatttcggcgctaaactcaacagtggcggcaccttg
atcgctttgcgcagaaccgcctcaggcaacaatcacatcgaagcatcaaagtctgttgaa
gactggatcactttcatcgaagaagcggaattataa
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