Candidatus Fluviicola riflensis: CHH17_15375
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Entry
CHH17_15375 CDS
T05019
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_15375
Enzymes [BR:
flu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CHH17_15375
DNA repair and recombination proteins [BR:
flu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CHH17_15375
Prokaryotic type
CHH17_15375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Polyhedrin
Motif
Other DBs
NCBI-ProteinID:
ASS50979
LinkDB
All DBs
Position
complement(3565932..3567239)
Genome browser
AA seq
435 aa
AA seq
DB search
MESKKTTLFWHRRDLRITDNAGLFKALKHGFPVQPVFIFDTTILEQLPRNDQRVLFIHRE
INALKKQYLELGSDLLVVMGNPIDQIPELVKELNAQAVFTNRDYEPYALQRDKQLAELLQ
QQSVEFVGAKDHVIFEKGEVVKADGKPYTVFTPYMRRWKENLSEFYIKSYPVEKYVDNLL
QVSESFESISLEKLGFSDQQTVVFPGRIPAVEIIQNYHETRDIPSVNGTSRLSLHLRFGT
ISIRELVRLAQDTGEKFLNELIWRDFYQMIIFHFPQSVTKAFKPEYDRIKWEHHEEHFRL
WCEGKTGYPLVDAGMRELNTTGHMHNRVRMVTASFLTKHLLLDWRWGERYFAEKLLDFEL
ASNVGGWQWAASSGCDAAPYFRVFNPTLQQEKFDPKFEYIRKWIPEFGTETYPQPIVDHA
FARERVLTRYKNGLS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaagaaaacaacgcttttctggcaccggcgcgatttacgcattacagacaat
gccggactttttaaagctttgaaacacgggtttcctgttcagcctgtttttattttcgac
acaaccattcttgaacagttgcctcgcaatgatcagcgggtattgtttatccacagggaa
ataaatgcgcttaaaaaacaatacctggaattgggtagcgatctcctggttgtcatggga
aacccaattgaccaaattccggaattggtcaaggaactgaatgctcaagctgtttttacc
aaccgcgattacgaaccgtatgcgcttcagcgcgacaaacaattggcggaattactacag
caacaatcggtagaattcgttggcgcgaaagaccatgtgatttttgaaaaaggagaagtg
gtaaaggctgatggaaaaccgtatactgtttttacaccgtacatgcgccggtggaaagaa
aatctttcggagttttatatcaaaagctatccggtggaaaagtatgtggataatttacta
caggtttccgaatcgtttgaaagtatttcacttgaaaaattagggttttcagatcagcaa
acggtggtttttcctggtcggattcctgcggttgaaatcattcaaaattaccatgaaacg
cgcgacattccttctgtaaacggcacttcacgcctgagtttacatctccggttcgggacc
atatctatccgtgaattggtacgtttggcgcaagataccggagaaaaattcctcaatgaa
ttgatctggcgcgatttctatcaaatgatcattttccattttccgcaatcggttacaaag
gcttttaaacccgaatacgaccgcatcaagtgggaacaccacgaagagcatttccggttg
tggtgtgaaggaaaaacgggttatccgctggtagatgcgggcatgcgtgaactgaatacc
accggacacatgcacaatcgcgttcgcatggttacagccagttttctcaccaaacattta
ttgctcgactggcgttggggcgaacggtattttgccgaaaaattactggattttgaattg
gcaagtaatgtaggtggctggcaatgggccgcgagttcaggttgtgatgccgcgccttat
ttccgggtgtttaatccaacattacaacaggaaaaattcgacccgaaatttgaatacatc
cgtaaatggattcctgaattcggaacggaaacctacccgcaaccaatcgtcgatcatgca
ttcgcccgcgaacgggtattgacccggtacaaaaatggattgtcgtag
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