Candidatus Fluviicola riflensis: CHH17_17690
Help
Entry
CHH17_17690 CDS
T05019
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHH17_17690
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
flu01007
]
CHH17_17690
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flu03016
]
CHH17_17690
Enzymes [BR:
flu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
CHH17_17690
Amino acid related enzymes [BR:
flu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
CHH17_17690
Transfer RNA biogenesis [BR:
flu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CHH17_17690
Prokaryotic type
CHH17_17690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1
DALR_2
CysS_C
tRNA-synt_1g
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ASS50525
LinkDB
All DBs
Position
complement(4105855..4107333)
Genome browser
AA seq
492 aa
AA seq
DB search
MCMNTAGELQIYNSLSGKKERFTPIHANRVGLYVCGPTLYSEPHMGNMRTFINFDMVYRY
LLKLGYAVKYVRNITDAGHITNSAGEAVDSIGKAARLEQVQSLEIVYKYNVKFQELQRIY
NMLPPSIEPTATAHIQEQIEIIEQILDNGFAYVVNGSVYFDVKAYSQKYNYGILSGRKID
ELEEETRELNAQEEKRFFADFALWKKANPDDMQIWRSPWGDGNPGWHIECTAMSTKYLGP
TFDIHGGGMDLKFPHHEDEIAQSCGAMGCNPANIWMHANMLNVNGQKMSKSLGNFFLPKE
IVEGTSDVFNKPYSPNVLRFFMMQAHYRSTLDFTPTALDAAEKGFGRLTDALNLLEKVPT
GTSSSFDVKELIAGFYSAMNDDFNAPILVANLFEAVKRLNLINDEKDSITAEDLALLKTE
MHAFVYDVLGVHPLEAPNNDSKLAPVMDLVLELRQLSRENKDWTTSDKIRDQLTAAGIVV
KDGKDGVTWSAQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatgaataccgctggcgaattacagatttacaatagtctttcagggaaaaaagaa
cgtttcacacctattcacgcaaaccgcgtgggcttgtatgtgtgcggaccgacgctctac
agtgaaccgcacatgggcaatatgcgcacctttatcaacttcgatatggtgtatcgctat
ttgctcaaactgggttatgcggtgaagtatgtgcgcaacattactgacgccggacacatt
accaacagcgccggtgaagccgttgacagtattgggaaagccgctcgcctggaacaagtg
caatcactggaaatcgtgtacaaatacaacgtgaaattccaggaattgcaacgcatttac
aacatgttgccgccaagtatcgaacctacagcaaccgcacatattcaggaacaaatcgag
atcatcgaacaaattcttgacaacggatttgcttacgtggtaaacggttcggtgtatttt
gatgtgaaagcctatagccagaaatacaattatggtattttgagcggtcgcaaaattgat
gaactcgaagaagaaacccgcgaattgaacgctcaggaagaaaaacgtttcttcgccgat
ttcgcattgtggaaaaaagccaatcctgacgatatgcagatctggcgctcgccatgggga
gacggaaatccgggctggcacatcgaatgtacagcaatgagtaccaagtacctcgggccg
actttcgatattcacggtggtggaatggatttgaaatttccgcaccacgaagatgaaatc
gcccaaagttgcggcgcaatgggttgcaatccggcgaatatctggatgcacgccaatatg
ctgaacgtgaatggacaaaaaatgagtaaatcgcttgggaatttcttcttaccgaaggaa
attgtggaaggaaccagcgacgtttttaataaaccttacagtccgaatgtgcttcgcttt
tttatgatgcaggcacattaccgcagtacgctcgattttacaccaacagcattggatgcc
gctgaaaaagggttcggccgattgactgatgccttgaatttgctggagaaagtaccgaca
gggacaagttcttccttcgatgtaaaggaactgattgccggtttttattcggccatgaac
gatgattttaacgcgcctatcctggttgcgaatctgtttgaagctgtgaaacgcctcaac
ctgatcaacgacgaaaaagacagcattactgctgaagatctggctttgctcaaaacggaa
atgcatgcgtttgtctatgatgttttgggagttcatcctttggaagctccgaataacgat
tccaagctggctcctgtaatggatttggtattggaattgcgtcagctttcacgcgaaaat
aaggattggacaacttccgataaaatccgcgatcaattgacggctgccggaatcgtggta
aaagacggcaaagacggcgttacgtggtcggcccaataa
DBGET
integrated database retrieval system
