Candidatus Fluviicola riflensis: CHH17_17995
Help
Entry
CHH17_17995 CDS
T05019
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flu03016
]
CHH17_17995
Transfer RNA biogenesis [BR:
flu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CHH17_17995
Prokaryotic type
Methyltransferases
CHH17_17995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
Roc
GCV_T
Arf
AAA_28
ABC_tran
NfeD1b_N
GBP
AAA_25
AAA_35
AAA_7
AAA_18
DUF5906
Sulfotransfer_3
Motif
Other DBs
NCBI-ProteinID:
ASS50586
LinkDB
All DBs
Position
4187160..4188569
Genome browser
AA seq
469 aa
AA seq
DB search
MNNSFSSDTICALSTAQGMGAIAVIRVSGKQALEIASSVFSKSLEEAASHTAHFGRIRTS
EGEIIDEVLITVLREGHSFTGEHTVEIACHGSQFIQQQILQLLLERGCRMAEPGEFTMRA
FMNGRMDLSQAEAVADLIASESKRAHEVAMKQMRGGFSNELKTLREKLIHFASLVELELD
FAEEDVEFADRTQLNQLIIEVLNYVQRLIQSFALGNVLKNGVPVAIVGAPNTGKSTLLNQ
LLGEERAIVSNIAGTTRDVIEETLNIDGILFRLIDTAGIREDAEAIEALGIERSHEKIKQ
AQLVLIMSDYSLTASNQEGHQSMNETEAAEWSDHLSEQFPDKHFLVVGNKADLRATKDNT
LWQHATPLLPISAKTGEGIIELKKWLVDQVMGDFNTQTDTIVTNARHLDALHKTAESLEK
AKWGLDTNVTGDFVAMDIRQAMFELGTITGDISTEDLLGNIFSKFCIGK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattcgttttcttccgataccatttgtgctctttcaaccgcccagggaatgggt
gccatcgccgtgatccgggtttcggggaaacaggctttggaaattgcctcatcggtattt
tcgaaatcgttggaggaagctgcgtctcatacggcacatttcggacgaatccgaacatcg
gaaggtgagatcattgacgaagtattgattaccgttttgcgcgaaggacatagctttacg
ggcgaacacacggttgaaattgcctgccacggttcgcaatttattcagcagcagatcctg
caattgttattggaacgcggttgccgcatggccgagccgggtgaatttacgatgcgcgct
tttatgaacggccgcatggatttgtcgcaagccgaagccgttgccgacctgattgcttct
gagtcgaaacgggcacacgaagtcgcgatgaaacagatgcgtggcggcttctccaatgaa
ctaaaaacactgcgtgaaaaattaattcactttgcatctttagttgaattggagcttgat
tttgctgaggaagatgtagaatttgctgatcgcacacaattaaatcaactaattatagag
gtgttgaattatgttcaacggcttatccaatcatttgcgctcgggaatgtgctcaaaaac
ggagttccggtagcgattgttggcgcgccaaacacagggaaaagcacgttgctgaaccaa
cttttgggtgaagaacgcgcgatcgtgagcaacattgcgggaaccacgcgcgatgtgatc
gaagaaacattgaacatcgacgggatcttgttccgtttgattgataccgccggaatccgg
gaagatgccgaagccattgaagcgttgggaatagagcgttcgcacgagaaaatcaaacag
gcgcaactcgtgttgatcatgagcgattacagcctgacggcttcaaaccaggaaggccac
caatcgatgaatgagacggaagccgccgagtggagcgatcatttgtcggaacaatttccg
gataaacactttttggtggtcggcaacaaagctgatttacgcgcgacgaaagacaacaca
ctttggcagcatgccactccgttattacccatcagcgccaaaaccggcgaaggaatcatc
gaactaaaaaaatggttagttgaccaggtcatgggtgatttcaacacgcaaaccgacacg
attgtgaccaatgcacgtcacctggatgcgctgcacaaaaccgccgaatcactcgaaaaa
gccaaatggggactcgacaccaacgttacaggagattttgtagccatggacattcgccag
gcgatgtttgagctcggcacgattacgggagatatttctaccgaggatttgctggggaat
atctttagtaagttttgtatcggaaagtaa
DBGET
integrated database retrieval system
