Candidatus Fluviicola riflensis: CHH17_18275
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Entry
CHH17_18275 CDS
T05019
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHH17_18275 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
flu01007
]
CHH17_18275 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flu03016
]
CHH17_18275 (trpS)
Enzymes [BR:
flu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
CHH17_18275 (trpS)
Amino acid related enzymes [BR:
flu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
CHH17_18275 (trpS)
Transfer RNA biogenesis [BR:
flu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CHH17_18275 (trpS)
Prokaryotic type
CHH17_18275 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
ASS50995
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All DBs
Position
4251128..4252096
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AA seq
322 aa
AA seq
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MARILTGIQSTGTPHLGNLLGAILPAIELAKSGNNDSFLFIADMHSLTQIKDGNVLRQNT
YSTAAVWLACGLDPQKTVFYRQSDIPEVTELTWYLLCFFPVPRLELAHGYKDKKDRLSDV
NGGLFTYPILMAADILLYDANQVPVGKDQLQHIEMTRDVAERFHHLNGETFVLPEAKIDE
NTMLVPGIDGEKMSKSRNNFINIFLPEKELRKQVMAIVTDSKGLEDVKNPDECNIFALYK
LLADENAIQTMRNNYTAGGYGYGHAKLALFELILTKFEQERTRYDYLMNNLSEIDAALEI
GAEKARLVAKDVLKRVRQKIGY
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcattctcactggtattcaaagcaccggaactccgcatttgggaaatttactc
ggcgcgatcctgcctgcaatcgaattggcgaaaagcggtaataacgactcgttcctgttt
atcgccgatatgcactcgcttacacaaatcaaagacggcaatgttttacgtcaaaacacg
tactcaacagcggcagtttggctcgcttgcggactcgatccgcaaaaaacagtgttttac
cgccaaagcgacattccggaagtaactgaattgacgtggtatctactctgtttttttccg
gttccccgattggaacttgcccatggatacaaagacaaaaaagatcgtctgagcgacgtc
aacggcggattgtttacctacccgatactgatggccgcggatattttattgtatgacgcc
aaccaggttccggttggaaaagaccaattgcagcacattgaaatgacacgtgatgtggcc
gaacgttttcatcatttgaacggcgaaacgtttgtgcttccggaggcgaagatcgatgaa
aacacgatgctggttccgggaatcgacggtgagaaaatgagcaaatcgcgcaacaatttc
atcaacatctttctccctgaaaaagaattgcgcaaacaagttatggccatcgtcaccgac
agcaaggggcttgaggatgtgaaaaatccggatgaatgcaacatttttgccctttacaaa
ttactggccgacgaaaatgctattcaaaccatgcgaaacaactatacagcaggcggttat
ggttacggacatgccaaattggccttgtttgaattaattttaaccaaattcgaacaggaa
cgaacacgttatgattacctgatgaataacctaagcgaaatagacgcagctttagaaatt
ggagcggaaaaagcacgactagtggcaaaagatgtattgaagcgggttcgccaaaaaatc
ggatactaa
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