Candidatus Fluviicola riflensis: CHH17_18365
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Entry
CHH17_18365 CDS
T05019
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_18365
DNA repair and recombination proteins [BR:
flu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CHH17_18365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
AAA
ChlI
DnaB_C
Lon_C
CobU
AAA_22
AAA_24
AAA_14
DUF7125
NACHT
RsgA_GTPase
nSTAND_NTPase5
AAA_16
nSTAND3
DZR
ABC_tran
AAA_5
Elong_Iki1
NTPase_1
DUF7129
DUF2275
SLFN-g3_helicase
Isochorismatase
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
ASS50657
LinkDB
All DBs
Position
complement(4280401..4281762)
Genome browser
AA seq
453 aa
AA seq
DB search
MAKVKSAFFCQNCGYETPKWLGKCPSCSEWNTFVEELVEKNLPQIVAFSTSSGKSAKAQA
LQTIESNGQRRIQLPDPEINRVLGDGLVPGSLVLFGGEPGIGKSTLLLQLAVQVQLRVLY
VSGEESDQQIKMRAERIGQQNEACFILTETNIQNIFKQAEETTPQLLIIDSIQTLFSSAI
ESAPGSISQVRECTAQLLRYAKMTEVPVFIIGHITKEGSLAGPKVLEHMVDCVIQFEGDQ
HHVYRLLRGIKNRFGSTNELGIYEMSGSGLRAVENPSEILISNGDSGLSGVAIAATLEGL
RPLLIEVQALVSTAAYGTPQRSSTGFDLRRLNMLLAVMEKRCGFKLGAKDVFLNIAGGIR
VDDPAIDLAVVAAVLSSNADIAIERSICCSAEVGLSGEIRPVNRIDQRIREAEKLGFEKI
IVSAYNKGLDQANYKIELVQCTRIDEVVRALFA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtaaaatcagcttttttctgtcaaaactgcggttatgagaccccgaaatgg
ttggggaaatgtccgtcgtgcagtgaatggaacacctttgtggaagaactcgttgaaaag
aatcttccgcaaattgtagcgttttcaacttcttccggaaaaagtgccaaagcgcaagcc
ctccaaaccattgaaagtaacggacaacgacgtattcaacttcccgatcctgaaataaac
cgcgtattgggcgatggactcgttcccggatcattagtgttgttcggcggagaaccaggt
attggaaaatcaacattgcttttgcagctagccgttcaggtacaattgcgcgtattgtat
gtttccggagaagaaagtgatcagcagatcaaaatgcgggcagaacgcattggccagcaa
aatgaagcctgttttattcttaccgaaaccaatatccagaacatctttaaacaggcggaa
gaaactacccctcaactgcttattatcgattccattcaaacgctcttcagttcggctata
gaaagcgccccgggaagtatttcacaagtcagggaatgtaccgctcaattgcttcgctac
gcaaaaatgaccgaggtgcccgtgtttattatcggacatattaccaaagaaggttcgctt
gccggtccgaaagtattggagcacatggttgattgcgtaattcagtttgaaggagatcag
catcatgtttaccgactcctgcgaggcatcaaaaaccgtttcggaagcaccaacgaactg
ggtatctatgaaatgagcggaagcggcctgcgtgctgttgaaaacccgtcggaaattctc
atttcgaatggcgactcgggcttaagcggtgtcgcgattgcagcaacgctggaaggactc
cggcctttacttatcgaagtgcaggcgttagtgagcacagccgcttatggaacgccgcaa
cgctcatcaaccggttttgatcttaggcgcctcaacatgttgctcgccgtcatggaaaaa
cgctgcggattcaaactcggggcaaaagatgtgtttttaaatatcgccggtggaattcgt
gtggatgatcctgccatcgacttggcagttgtagctgcagtactttcaagcaacgctgat
atcgccatcgaacgatcaatctgctgttcggcagaagtcggtttgtcaggtgaaatcagg
ccggtgaaccgcattgatcaacgcattcgtgaagctgaaaaactgggctttgaaaaaatc
attgtttccgcctacaacaaaggcctcgaccaagccaattacaaaatcgaattagttcaa
tgtacccgaattgatgaggttgtacgtgcactttttgcttaa
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