Candidatus Fluviicola riflensis: CHH17_18500
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Entry
CHH17_18500 CDS
T05019
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00450
Selenocompound metabolism
flu00970
Aminoacyl-tRNA biosynthesis
flu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CHH17_18500
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHH17_18500
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
flu01007
]
CHH17_18500
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flu03016
]
CHH17_18500
Enzymes [BR:
flu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
CHH17_18500
Amino acid related enzymes [BR:
flu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CHH17_18500
Transfer RNA biogenesis [BR:
flu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CHH17_18500
Prokaryotic type
Other AARSs
CHH17_18500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
YvbH_ext
Motif
Other DBs
NCBI-ProteinID:
ASS50682
LinkDB
All DBs
Position
4316817..4318880
Genome browser
AA seq
687 aa
AA seq
DB search
MSKAKYTVTAALPYANGPLHLGHVAGVYLPADIFVRFLRKNGHDVAFICGSDEHGAAITL
RAKKEGITPQEIVDKYNKIIGDSFRQFDISFDIFHRTSEKLHHETAQEFFKVLEAKGKFI
QETTEQYYDEDFQQFLADRYITGECPNCQNPSAYGDQCEKCGSDLSPTDLKNPVSTLSGK
SPVLRTTSHWFLPMDRHEEWLRPWIKEGILDGKQQHDPKAWRNQVIGQCMSWIDGGLHPR
AMTRDLDWGVPVPLPDSDGKVLYVWLDAPIGYISATKQWALDNGKDWKDYWVTDGTNDRK
LVHFIGKDNIVFHAIIFPILLKDHGNFILPDNVPAYEFLNLEGDKFSTSRNWAVWLHEYL
ERYPDKIDELKYTLTCIAPENKDSEFTWKEFQARVNNELADILGNFVNRALVLTQKYYEG
AVPACGELTDTDLAVLSDMKAIPARIAELVYQYKLRDAQAEAMQLARIGNKYLADNEPWK
LVKTDPKRVETIMHIALQITANLGLVLDPFLPETAAKLRAFMNIEAQDWNASGSLLVEAG
HQTAVPTILFPKIDDEFVAREVAFLQASQPAASNFPPQKEETSFDDFTKMDIRLGTIVDA
IRVPKADKLLQLTVNTGLDTRTIVSGIAEHYAPEEVVGKTVAVLMNLAPRKIRGVESQGM
ILMAENEEGKLSFMIPEKGFEAGGEIR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagccaaatataccgttacggcagcattgccctatgcaaacggaccgcttcac
ctcgggcatgtcgccggagtgtaccttcctgccgatattttcgtacgctttttgcgtaaa
aacggacacgacgtggccttcatttgcggttccgacgaacatggtgctgctattacgctt
cgcgccaaaaaagaaggcataacgccacaggaaattgtagataaatacaacaagatcatt
ggcgattcatttcgtcagtttgatatttcattcgatatttttcaccgtacatccgaaaag
ctgcaccacgaaaccgcacaggaatttttcaaagtgctggaagcaaagggcaagttcata
caggaaacaaccgaacagtattacgatgaagattttcagcaatttttagctgatcgctac
atcacaggtgaatgtccgaactgtcaaaacccaagcgcttacggggatcaatgcgagaaa
tgcggctccgatttgagtcctaccgatttaaaaaatccggtttctaccctgagcgggaaa
tcaccggttctgagaactacatcacactggtttttaccaatggaccgacacgaagaatgg
cttcgtccttggatcaaggaaggaattctcgacggcaaacaacaacacgacccgaaagcg
tggcgaaaccaggtaatcggacaatgtatgtcatggattgacggcggtttgcatccgaga
gccatgacgcgtgatttagattggggtgtaccagtcccgcttcctgattcagacggaaaa
gtattgtatgtatggctcgacgctccgattggctatatttcggccaccaaacaatgggcg
ctcgacaacggaaaagactggaaagattattgggtaaccgacggaaccaacgaccggaaa
ctggtgcatttcatcgggaaagacaacattgtttttcatgcgatcatcttcccgatttta
ctgaaagaccacggcaatttcattttaccggacaacgtacccgcatacgaattcctgaac
ctggaaggcgataaattctctacttcccgcaattgggcagtttggttgcatgaatatttg
gaacgttatccggataaaattgacgagctgaaatatacgcttacctgcattgctcctgag
aacaaggattcggaatttacctggaaagaattccaggcacgtgtaaataacgaattggca
gacattctcggaaacttcgtgaatcgtgcgctggttctgacccaaaaatattatgaaggc
gccgttcctgcttgtggtgaattaaccgacactgacttggctgtattgtctgatatgaaa
gccattccggcgcgtattgcagagttggtgtaccaatataaactgcgtgacgcacaagcc
gaagccatgcaattggcccgaatcgggaataaatatttagcagataacgaaccgtggaaa
ttggtgaaaaccgatccgaaacgtgtggaaacgatcatgcacattgcgttgcaaattacc
gccaatcttggcttggtactggatccgttcttacccgaaacggcagctaaattgcgtgcg
tttatgaacatcgaagcgcaggattggaatgcttcaggaagtttgttggttgaggccgga
catcaaactgctgttccaactattttgttcccaaaaatcgatgatgaatttgtggcacgt
gaagtagcatttttacaagcttcgcaacctgctgcaagcaatttcccacctcaaaaagaa
gaaacttcgtttgatgatttcacgaaaatggacatccgcctgggaaccatcgttgatgcc
attcgcgtaccgaaagccgataaattactgcaacttaccgtaaatacaggtttggataca
cgtaccattgtttcaggtattgccgagcattatgcacctgaagaagttgtcgggaaaacg
gttgctgtattgatgaatcttgctccgcgaaaaattcgtggtgtagaatcgcaaggcatg
attttaatggctgaaaacgaagaaggaaaattgagttttatgatccccgaaaagggattt
gaggcaggtggtgaaattcgataa
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