Candidatus Fluviicola riflensis: CHH17_19055
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Entry
CHH17_19055 CDS
T05019
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flu03400
]
CHH17_19055
DNA repair and recombination proteins [BR:
flu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CHH17_19055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
ASS50783
LinkDB
All DBs
Position
4451668..4452090
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AA seq
140 aa
AA seq
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MVDVHSSEVRSYNMSRIRGRDTKPEMLVRRFLFSRGLRYKLHDKLLPGKPDLVFPKYKTV
VFVHGCFWHGHKGCRYFVIPKTRTEWWVEKIEKNHDKDVENRNKLNKSGWKIIVVWECEL
KQDSLSRLDEVLLEITDVME
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgttcattcgtctgaagtgaggagttataatatgagccggattcgtggaaga
gacacaaagcctgaaatgttagtccgtagatttttatttagtcgaggattgcgctataaa
cttcatgataaattgctaccgggaaaaccagatcttgtttttccaaaatataaaacggtt
gtgttcgtacatggatgtttttggcatggtcataaaggctgtcgttattttgtaattcca
aagaccagaacagaatggtgggtcgaaaaaattgaaaagaaccacgacaaggatgttgaa
aatcgcaataagctgaataaatcaggatggaaaattattgtcgtttgggaatgtgaactt
aagcaagactcattatctcgcttagatgaggtcctactggaaataacagacgttatggaa
tag
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