Flavihumibacter rivuli: KJS94_00135
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Entry
KJS94_00135 CDS
T08011
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KJS94_00135 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
flv01007
]
KJS94_00135 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flv03016
]
KJS94_00135 (aspS)
03029 Mitochondrial biogenesis [BR:
flv03029
]
KJS94_00135 (aspS)
Enzymes [BR:
flv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
KJS94_00135 (aspS)
Amino acid related enzymes [BR:
flv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KJS94_00135 (aspS)
Transfer RNA biogenesis [BR:
flv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KJS94_00135 (aspS)
Prokaryotic type
Other AARSs
KJS94_00135 (aspS)
Mitochondrial biogenesis [BR:
flv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
KJS94_00135 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ULQ56610
LinkDB
All DBs
Position
complement(29038..30864)
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AA seq
608 aa
AA seq
DB search
MYRSHTCGELRISHVNQEVTLAGWVQTVRKFGSITFVDLRDRYGITQLLFGEGLNAQLDS
QPLGREFVLQVKGKVVERSNKNPNIPTGDIELEVISFSILNKAATPPFTIQDDTDGGDDL
RMKFRYLDLRRNAVKRNLELRYAVNRSARNYLHENHFMDIETPFLIKSTPEGARDFVVPS
RMNPGQFYALPQSPQTFKQLLMVSGYDRYYQVVKCFRDEDLRADRQPEFTQIDCEMSFVE
QEDILNMFEGLIKRIFKDVKNIDYTDKVERMTWNDAMLRFGNDKPDIRFGMELTNFKTAF
EGQSGHPEALKIFEESGFKVFNEAETVLAIAVPGCSEYTRKQLDELTEWVKRPQIGMNGL
VYIKCNTDGSYKSSVDKFFPEDKLKALADICGAQTGDLILILAGREERTRKATSELRLEM
GEKLGLRKKDEFKLLWVLDFPLFEYAEEENRWVARHHPFTSPKPAHIDIMINNNPVIDNP
AEYLKHPYANIKANAYDMVLNGNEIGGGSIRIFQRELQEKMFDALGMSKEEANHKFGFLL
GAFEYGAPPHGGIAFGFDRLCAILGGSESIRDFIAFPKNNSGRDVMLDAPSAIDAKQFDE
LQIKLDLK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtatagatcgcatacctgtggtgaattgcgcatcagccacgtgaaccaggaagtgacc
cttgccggttgggttcaaacggtaagaaaattcggaagcatcacttttgtggacctgcgc
gaccggtatggcattacccaactccttttcggggaaggactcaacgcccagctcgatagc
cagccattgggcagggagtttgtactgcaagtgaaaggcaaggtcgtggaaaggagtaat
aagaaccccaatatccctacgggcgacatagaacttgaagtaatcagctttagcattctc
aataaggctgccaccccaccctttactatccaggatgatacggacggcggtgatgacctg
aggatgaaattccgttaccttgaccttcgccgtaatgcggtgaagcgcaacctggagttg
cgttacgcagtgaacaggtccgcaaggaactacctccatgaaaatcatttcatggatatt
gaaacacccttcctgatcaagtcgaccccggaaggtgcccgcgacttcgtggttccttca
cgcatgaaccccggacaattctacgcccttccccagagcccgcagaccttcaagcaattg
ctgatggtaagtggttatgaccgttactaccaggtagtaaagtgtttcagggatgaagac
ctgcgcgcagaccgccagccggaatttacccagatcgactgcgaaatgagctttgtggaa
caggaggatatcctgaacatgttcgaaggcctgatcaagcgcattttcaaggatgtgaag
aacatcgattataccgataaggtggagcgcatgacctggaacgatgccatgctgcgtttc
ggtaacgacaagcccgatatccgctttggcatggagttgaccaacttcaagaccgcattc
gaaggccaatccggccatcctgaagccttgaagatctttgaagaaagtggcttcaaggtg
ttcaatgaagcagagaccgtcctggccattgcagtgcccggatgcagcgaatatacccgg
aagcaactggatgaactgacagagtgggtgaagcgtccccagatcggcatgaacggcctg
gtgtacatcaagtgcaatacagatggcagctacaagagcagtgttgacaagttcttccct
gaggacaaactgaaggccttagcggatatctgtggagcccaaaccggcgacctgatccta
atcctggcaggaagggaggaacgtaccaggaaagccaccagcgaactgcgtttggaaatg
ggcgaaaaacttggcctgaggaagaaggatgagttcaaactgctttgggtattggacttc
ccactcttcgaatatgcagaggaagagaaccgttgggttgcccgccaccatcccttcact
tctcccaaacctgcacatatcgatatcatgatcaataacaacccggtgatcgacaatccg
gccgaatacctcaagcatccctatgcgaacatcaaggccaatgcctacgacatggtattg
aacgggaatgagatcggcggcggctcgatcaggatcttccagcgtgaattgcaggaaaag
atgtttgatgccctgggcatgagcaaggaagaagccaaccataaattcgggttcctgctg
ggagccttcgaatatggtgccccgccacatggaggcatagcttttggcttcgaccgcctt
tgtgccattctgggtggcagcgaaagcatccgtgatttcatcgctttccccaagaacaat
agcggccgcgatgtaatgctggatgccccctcagccattgacgcaaaacagttcgatgaa
ctgcagatcaaactagacctcaaataa
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