Flavihumibacter rivuli: KJS94_00345
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Entry
KJS94_00345 CDS
T08011
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
flv
Flavihumibacter rivuli
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flv03016
]
KJS94_00345 (truA)
Enzymes [BR:
flv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KJS94_00345 (truA)
Transfer RNA biogenesis [BR:
flv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KJS94_00345 (truA)
Prokaryotic type
KJS94_00345 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ULQ56649
LinkDB
All DBs
Position
84759..85505
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AA seq
248 aa
AA seq
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MNRYFIEVAYKGAGYSGFQVQENAHTVQAELEKALLVLFREPVSLTGSSRTDAGVHALQN
YFHTDTAAALSDRVVYNLNAILPEDLAVNSIRKVHPDAHCRFDAVSREYRYRIYRHKHPF
LADRAYFFPYTLDLDRMQEAAGMLMEYEDFTSFSKRNTQVKTFKCRIMESRWEEEEWGLA
YYVKGNRFLRGMVRALTATMLRVGRHKLTIDQFRAIIEARDCTKADFAVPPHGLFLEKVN
YPEGYFER
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggtattttattgaagttgcgtataagggtgcaggttattcgggctttcaggtc
caggaaaatgcccataccgttcaggctgaattagaaaaggcattgctggtattgttcagg
gagccggtttcccttaccggctcgtccaggacagatgcgggggtacatgcattacaaaat
tatttccatacagatactgcggcggccttatccgatcgggttgtttacaacctgaacgcc
atcctgcctgaagacctggcagtgaatagtatccggaaagtgcatcctgatgcgcattgc
cgttttgatgcggtgagcagggaataccgttaccggatctaccggcataagcaccctttc
ctggcagaccgtgcttatttcttcccatatacgctggatctggacaggatgcaggaagcg
gccgggatgttgatggagtatgaggactttacaagtttcagcaaacgcaatacgcaggtg
aagaccttcaagtgccggatcatggaaagcaggtgggaggaggaagagtgggggcttgcg
tattatgtaaaggggaaccgtttcctgcgtgggatggtgagggcgcttacggcaactatg
ttaagggtaggccggcataagttgactattgaccagttcagggcgatcattgaagcgagg
gattgtacgaaagctgattttgcagtgccgccgcatggtttgtttttggagaaggtgaac
tatcctgaagggtattttgagcggtag
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integrated database retrieval system
