Flavihumibacter rivuli: KJS94_00905
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Entry
KJS94_00905 CDS
T08011
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
flv
Flavihumibacter rivuli
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flv03400
]
KJS94_00905
Enzymes [BR:
flv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KJS94_00905
DNA repair and recombination proteins [BR:
flv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KJS94_00905
Prokaryotic type
KJS94_00905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ULQ56753
LinkDB
All DBs
Position
211945..213255
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AA seq
436 aa
AA seq
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MHSSPVAIMWFRRDLRLKDNAALYHALTSGLPVVPVFIFDRNILDDLEDKSDRRVEFIHA
ALMEMQDELLKIGSTMDVRYGFPKEVYAQLLKEYKVQKVYTNHDYEPYAQERDAEVAAII
EGNGGSFHHFKDQVIFEKGEVVKDDGKPYTVFTPYSRRWKATLNEFYLKSYPTEKYFGAF
LKQVPRALPSLDSLGFQEVAKPFPSRELDEELVRKYSDQRDIPSIQGTSRLGVHLRFGTI
SIRELARRAGALNETFLNELIWRDFYHMILANFPQVGKGMAFKPEYDQIKWRNDEGEFRR
WCEGTTGYPIVDAGMRELNATGFMHNRVRMIVASFLTKHLLIDWRWGEAYFAKKLLDFDF
AANNGGWQWAAGSGCDAAPYFRVFNPYLQTQKFDPKLQYIRQWVPEFEGFGYPKPIVEHD
FARKRCLEVYSATLKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtagcccggttgcgatcatgtggttcagaagggatttgcgattgaaagataac
gcagcgctttaccatgcccttacaagtggactgcctgttgttcccgttttcatcttcgac
cggaacatcctggatgacctggaagataagtcggaccgcagggtggagttcatccatgcg
gcattgatggaaatgcaggatgagttattgaagattggttccaccatggatgttcgctac
ggctttccaaaggaggtgtacgcacaactcctgaaggagtacaaggtgcaaaaagtatat
accaatcatgactacgaaccctatgcacaggaacgcgatgcggaagtagcggcaataata
gaaggcaatgggggaagcttccatcatttcaaggaccaggtaatatttgagaagggtgag
gtggtaaaggatgacggtaagccctacacggtttttacgccttacagcaggagatggaag
gcgacccttaatgaattctacctgaagtcctatccaacggaaaaatatttcggtgcattc
ctgaagcaggtgccgagggcattgccctcactggattccctgggattccaggaggtggcg
aaacctttcccctccagggaattggatgaagagttggtcaggaagtacagcgaccaacgg
gatatcccatctatccagggaacctcccggttgggtgtgcatttgcggtttgggaccatc
agtatcagggagctggccagaagggcaggggcattgaatgagaccttcctgaatgaattg
atctggcgggatttttaccacatgatcctggcgaatttcccgcaggtggggaagggaatg
gcattcaagccggagtatgaccagatcaaatggcgcaatgatgaaggggagttcaggcgc
tggtgtgagggaactacaggatacccgatcgttgatgccgggatgagggaattgaatgcc
accgggttcatgcataaccgcgtaaggatgatcgtggcttccttccttaccaagcacctc
ctgatcgattggcgctggggagaagcctatttcgcgaagaaactcctggattttgatttt
gccgcaaacaatggtggctggcagtgggccgcgggtagtggttgcgatgccgccccttac
ttcagggtattcaatccctatttgcaaacacagaagttcgaccccaaactacagtatatc
cgtcaatgggtgccggagtttgaaggattcggttatccgaagccgatagttgagcatgat
ttcgccaggaagcgttgcctggaagtgtatagcgccacccttaagcgctga
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