Flavihumibacter rivuli: KJS94_02500
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Entry
KJS94_02500 CDS
T08011
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv00541
Biosynthesis of various nucleotide sugars
flv01100
Metabolic pathways
flv01250
Biosynthesis of nucleotide sugars
Module
flv_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KJS94_02500 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
flv01005
]
KJS94_02500 (kdsA)
Enzymes [BR:
flv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
KJS94_02500 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
flv01005
]
Lipid A
KJS94_02500 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Rsm22
GxGYxYP_N_2nd
Motif
Other DBs
NCBI-ProteinID:
ULQ57067
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Position
complement(584917..585738)
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AA seq
273 aa
AA seq
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MEQFLKDLFKRQTYDENSFFLIAGPCVIESEELLMEVADKVKTICHNLGIPYIFKSSYRK
ANRTSASSFTGLGDELGLGLLQKAGQAFHLPTTTDIHAHDEAAPAARYADVLQIPAFLCR
QTDLLVAAAETGKVINVKKGQFLSGPAMKFAVEKIRKAGNDKIILTERGTTFGYQDLVVD
YRNIPWMKAHGVPVVMDCTHSLQQPNQTSGVTGGNPQLIGTIAKAAIASGADGLFIETHP
DPSKALSDGANMLHLDKLEGLLQELVRIRKAVL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatttctgaaagacctctttaagaggcagacctatgacgagaatagttttttc
ctgatagccggaccatgtgtgatcgagagtgaagagcttttgatggaagtggctgacaag
gtgaagaccatttgccataacctgggcattccctatatctttaaatcttcttaccgcaag
gccaacaggaccagtgccagctctttcacggggctgggtgatgaactgggtctgggcctg
ctgcagaaggccggccaggccttccacctgcctaccaccactgatatccacgcccatgat
gaagcagcacccgcggcccggtatgccgacgtgttgcagatcccggccttcctttgccgc
cagaccgacctgctggtagcagctgccgagaccggcaaggtgatcaatgtgaagaaggga
cagttcctcagcggcccggccatgaagtttgccgttgaaaagatccgcaaagcgggcaat
gacaagatcattcttactgaaagaggcaccacctttggttaccaggacctggtagtggac
taccgcaatattccctggatgaaggcccatggtgtaccagtggtgatggattgtacccat
agccttcagcagcctaaccaaaccagcggtgtaacagggggtaatccccaactgatcggc
accatcgccaaggcagccattgcctccggtgccgatggcctgttcatcgaaacccacccg
gatccctccaaagccctcagcgatggcgccaacatgctccacctcgacaagttggaagga
ctcctgcaagaactggtaaggatcagaaaagcagtcctgtaa
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