Flavihumibacter rivuli: KJS94_04375
Help
Entry
KJS94_04375 CDS
T08011
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv03030
DNA replication
flv03430
Mismatch repair
flv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJS94_04375
03430 Mismatch repair
KJS94_04375
03440 Homologous recombination
KJS94_04375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flv03032
]
KJS94_04375
03400 DNA repair and recombination proteins [BR:
flv03400
]
KJS94_04375
Enzymes [BR:
flv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJS94_04375
DNA replication proteins [BR:
flv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KJS94_04375
DNA repair and recombination proteins [BR:
flv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KJS94_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
GIY_YIG_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ULQ57436
LinkDB
All DBs
Position
978375..979709
Genome browser
AA seq
444 aa
AA seq
DB search
MYAIVDIETTGGHAAGNGITEIAIVLHDGHGVEGRYHTLINPGQSIPRYIVSLTGITNEM
VATAPGFEEIAPTIYNLLEGRIFVAHNVNFDYSFLKHHLANAGLDLSLKKLCTVRLARKV
FPGLPSYSLGNLCRSLEIPVEDRHRALGDTMATVQLFERILQADVGSVVKEMLKGRNGDQ
YLPPHLPADQVNSLPHVPGVYYFLNQKQQILYVGKATNLHKRVKSHFSNNDGGKRKQEMM
RQIYQVSYRTTPSELMALVLESQEIRRIWPPFNRSQKKFHQQYGLYAFTDQKGYHRLIIE
KTRKNLPAIYTFNLIHEGQGLLRKISQLAEIPLDQNGRTWSIDMTTEHYNSRIRAALHTI
QASLPSFILLEENEQVHHEQVVYLIEKGRFYGMGVVKDRKRFPTSIDEWKSLLEPCPDND
YVRGLIYQYAMKKPHCKIDFDQGT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgtatgcgatcgttgacatagaaacaacaggtggacatgctgcaggtaatggcattaca
gagatcgccattgttttgcatgatggccatggtgtggaaggtcgctaccatacccttatc
aatcccggtcaatcgatccccaggtatattgtctccctgacaggcatcaccaatgaaatg
gtggctacggcacccggatttgaagaaattgcccctaccatctataacctgcttgagggc
aggatcttcgttgcccataatgttaactttgactattccttcctgaaacatcatttggcc
aatgcaggattagacctttccctgaaaaaactttgtaccgtaaggctggcaaggaaggta
ttcccgggtttgcccagttatagtttgggtaatctctgcaggagcctggaaatacctgtt
gaagacaggcaccgggcattaggtgataccatggcaacggtgcagttgtttgagcgcatc
ttgcaggcagatgtgggaagtgtggttaaggaaatgctgaagggaaggaacggcgaccaa
tacctcccacctcatttgccagcagaccaggtcaatagtttgccccatgtcccgggcgta
tattatttcctcaaccagaaacagcagatcctctatgttggtaaggccactaacctgcat
aagcgggtgaagagtcattttagtaataacgatgggggaaaacggaagcaggaaatgatg
cggcagatctaccaggtcagttatcgtacgacacccagcgaactgatggcacttgtattg
gaaagccaggaaattcgtcgcatttggccgccattcaacaggagccagaaaaaattccat
cagcaatatgggctctatgctttcacggaccagaaaggttaccatcggctgatcatagaa
aagacccggaaaaaccttcctgccatttataccttcaacctgatccatgaaggacagggg
ttgctacgaaagatcagccagctagctgaaatccctcttgaccagaatggccgtacctgg
tccattgatatgacgaccgaacattataattcgaggatcagggcagcccttcataccatt
caggcatccttacccagttttatcctcctggaggaaaatgaacaggttcaccatgaacag
gtggtctacctgattgaaaaaggcaggttttatggaatgggggttgttaaagacagaaaa
agattccctacttccattgatgaatggaagtcactactggagccctgtccggataatgac
tatgtcaggggactgatctaccaatatgcaatgaagaaaccccattgcaagatcgatttc
gaccaggggacatag
DBGET
integrated database retrieval system
