Flavihumibacter rivuli: KJS94_05315
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Entry
KJS94_05315 CDS
T08011
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
flv
Flavihumibacter rivuli
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flv03032
]
KJS94_05315 (gyrA)
03400 DNA repair and recombination proteins [BR:
flv03400
]
KJS94_05315 (gyrA)
Enzymes [BR:
flv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KJS94_05315 (gyrA)
DNA replication proteins [BR:
flv03032
]
Prokaryotic type
DNA Topoisomerases
KJS94_05315 (gyrA)
DNA repair and recombination proteins [BR:
flv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KJS94_05315 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ULQ57618
LinkDB
All DBs
Position
complement(1185980..1188580)
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AA seq
866 aa
AA seq
DB search
MEDNLTPQETNDSNRIISINIEEQMKTAYIDYSMSVIVGRALPDVRDGLKPVHRRILFAM
NELGITHNKPYKKSARIVGEVLGKYHPHGDTAVYDTMVRMAQEWSMRHTLIDGQGNFGSQ
DGDGPAAMRYTEVRLQRFAESMLEDIEKETVDFTLNFDDSLEEPTVLPTRIPQLLVNGST
GIAVGMATNMLPHNLGEVVDGCIAYIDNREITIDDLMKHVKAPDFPTGGIIWGIDGIRQA
MNTGRGRVVLRGKVHVDTKPSGREQIIITEVPYQVNRDALCDKIGSLVIDKTIEGIAHVN
NESNQKEGTRIVIDLKRDAVANVVINQLYKFTELQTSYGINNVALVKGRPRTLNLKELIH
EFVEFRHEVVVRRAQYELREAQRKAHILQGYLIALDHLDEVIALIRSSATPDIARENLVN
AGWGLDEIQAKAILELRLQRLTGMEREKIKEEYDELMKLIASLQELLGNEGLRYDLIKKE
LTEVKDRFATPRRSEITYLADEMNILDFIAEEDVVITISHLGYIKRTSATEYRAQRRGGR
GAIGGKTRDEDYIEHIFVASTHHTMIFFTEKGRCYWLKVYEIPEGEKNSKGRAIQNLMQL
PPDDKVRAIIDVANLDDKEFVQSHYIVLCTKKGIIKKTLLEDFSRPRQTGVNAITIVEGD
QLLDARMTDGNSEIMMAVKSGRAIRFPEEKVRPTGRGAIGVGGIEVDEDNDEVIGMICVG
KDDTSKTVLVVSEKGFGKRTPIDEYRITNRGGKGVKTINVTDKTGPLVGILDVTEKEDLM
ISCRSGLTIRTGISNIREAGRATQGVKLISLQEGDEIAAITKLDEFEQEAPVTEASADAE
PNEIPNSTDEPTGSGENPSTETGTEQ
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaatctgacgcctcaggaaacgaacgattccaacaggattatttcgatcaac
attgaagagcaaatgaagaccgcctacatcgactattccatgtcggtgatagttggtcgt
gcgctccctgatgtacgcgatggtttgaagcccgtacatcgcaggatcctttttgccatg
aatgaattgggtatcacccataacaaaccctataagaagtctgcccgtattgtcggggag
gtgctgggtaagtaccacccgcacggtgatacagcggtttacgataccatggtgcggatg
gcccaggaatggagcatgcgccatacccttatcgatggccagggtaacttcggtagccag
gatggtgatggcccggcggccatgcgttatacggaggtacgcctgcagcgctttgcagaa
agcatgctggaggatatcgagaaggaaacagttgattttaccctcaacttcgacgattcg
ctggaagaacccacggtactgcctacccgcattccccagttgctggtgaatggttcaacc
ggtatcgcggtaggtatggccaccaatatgcttccccataacctcggggaagtggtggac
ggctgtattgcgtatatagataaccgtgagataacgatcgatgacctgatgaagcatgtg
aaggcccccgatttccctactggtggtatcatctgggggattgatggcattcgccaggcc
atgaatacaggcaggggaagggtagtgctgaggggtaaggtgcatgtggataccaagccc
agtggccgtgagcagatcatcattacggaagttccctaccaggtaaaccgtgatgcgctt
tgtgacaagatcggttcgctggtgatcgataagaccatcgagggtatcgcccatgtgaac
aacgagtccaaccagaaggaaggtacccgtatcgttattgacctgaaacgcgatgccgtt
gccaatgtggtgatcaaccagttgtacaaattcacagagctgcaaacctcttatggcatc
aataatgtggccctggtaaaaggccgtccgcgtacccttaacctgaaggaactgatccat
gaattcgtggagttccgccatgaagtggtggtgcgcagggcccagtatgaactgagggag
gcgcagcgaaaagcgcatatcctccagggttacctgatcgcactggaccacctggatgaa
gtgatcgccctgatccgtagttccgccacgccggatattgcaagggagaacctggtgaat
gccggctggggactggatgagatccaggcaaaggccatcctggaactgcgcttgcagcga
ttgacaggcatggaaagagaaaagatcaaggaggagtatgatgaactgatgaagctgatc
gccagcctgcaggaattgcttggcaatgaaggactgcgttatgacctgatcaaaaaggaa
ctgacagaggtgaaggacaggtttgccactccacgcaggtcggagatcacctacctggcc
gatgagatgaatatccttgatttcattgcagaggaagatgtggtgatcaccatatcccat
ctcggctatatcaaacggacatccgcaaccgaataccgtgcccagcgcagaggtggaagg
ggagcgatagggggcaagacccgtgatgaggattatatcgagcacatatttgtggcttcc
acccaccatacaatgatcttcttcacggagaaaggaaggtgttactggctgaaggtgtat
gagatcccggaaggcgagaagaacagcaagggcagggccatccagaacctgatgcagctt
ccgccggatgataaggtgagggcgatcatcgatgtcgctaaccttgacgataaagaattc
gttcaatcccattatatcgttctttgtaccaagaagggcatcatcaagaagaccttgctg
gaagatttcagcaggccaaggcaaacgggtgttaatgccatcaccattgtggaaggcgac
cagttgctggatgccaggatgaccgatggcaacagcgagatcatgatggcggtgaagagt
ggccgggccatcaggttccctgaagagaaagtaaggccaaccggaaggggtgccattgga
gtaggcggtattgaagtggatgaagacaatgatgaggtaattggcatgatatgtgtcggg
aaggatgacacttccaaaaccgtattggtggtgagtgagaaaggatttgggaagcgcacc
ccgattgatgagtaccggatcaccaaccgtggcggtaaaggggtgaagaccatcaatgtt
acggacaagaccggaccattggtagggatccttgatgtaaccgagaaggaagacctcatg
atttcctgcaggagtggcctgaccatccggacgggaatctccaatatccgcgaagccgga
agggctacccaaggggtgaagctgatcagtctacaggaaggagatgagatagcagccatc
accaagctggatgagttcgagcaggaagccccggtaacagaagcctcagccgatgcagaa
cctaatgaaatcccaaattcaaccgatgaaccaaccggaagcggtgaaaacccatctacc
gaaaccgggacagaacaataa
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