Flavihumibacter rivuli: KJS94_06900
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Entry
KJS94_06900 CDS
T08011
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv03030
DNA replication
flv03430
Mismatch repair
flv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJS94_06900 (dnaE)
03430 Mismatch repair
KJS94_06900 (dnaE)
03440 Homologous recombination
KJS94_06900 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flv03032
]
KJS94_06900 (dnaE)
03400 DNA repair and recombination proteins [BR:
flv03400
]
KJS94_06900 (dnaE)
Enzymes [BR:
flv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJS94_06900 (dnaE)
DNA replication proteins [BR:
flv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KJS94_06900 (dnaE)
DNA repair and recombination proteins [BR:
flv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KJS94_06900 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
ULQ57926
LinkDB
All DBs
Position
1562339..1565983
Genome browser
AA seq
1214 aa
AA seq
DB search
MSKFSHLHCHTQYSLLDGAASIQDMYKKAIKEEMPAIAITDHGNMFGAFEFVSEAYKHKG
EDGKPRVKPIVGCEFYVVKDRHQKTFTKEQKDERYHQVLLAKNAKGYQNLIKLTSLGYTE
GMYSKYPRIDKELIEKYHEGLIATTCCIGAYVPQTILHDGEDAAEKEFKWWLDIFGEDYF
IELQRHNLKEQELINQVLLKFAVKFNVPVIATNDSHYTDRDDSNAHDILLCINTGEKQST
PGFDDFVNDDTHIKNRRFKFPNDQFYFKGTQEMKELFKDVPEAIDNTNMIVDRVELLNLK
KDILLPAFPIPKEFQVHDDANLNQWEYLKHLTYEGAKMRYTDITPDIQERLDFELFTIKT
MGFAGYFLIVSDFIRAGRDLGVFVGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNP
DRKSMPDIDTDFDDDGRQRVIDYVVQKYGKNQVAQIVTYGTMAAKMSIKDVARVLDLPLA
ESNALAKMVPEKPGIELGRVLTAPLTAKEGEKSLEAKEGLGPEDLESVRKLREIYHGTDL
RAQVLKEAERLEGSVRNTGIHAAGIIIAPDDLMNIIPVCTARDSELLVTQIEGSIIEEAG
VIKMDFLGLKTLTIIKNALQMIRENHGVEIEIDNIPLDDLKTFELYQRGDTIGTFQFESP
GMQKYLRDLKPDQFADLIAMNALYRPGPIAYIPNFIDRKHGREAITYDLPEMEEYLKETY
GITVYQEQVMLLAQKLAGFTKGDADVLRKAMGKKQKAVLDKMKAQFVEGASAKGHPKDKL
EKIWTDWEAFAQYAFNKSHSTCYAFVAYQTAYLKAHYPSEYMAAVLNNAGAIEKITFFME
ECKRMGLNVLGPDINESQKGFAVNQAGDIRFGLGGLKGVGEAGVESIIHDRKQNGPFSSV
FDLVKRVNQRTVNKKTMENLVYAGAFDCFPELHRAQYFFTPPGDNTNGLEKIIKYGNIYQ
AQSTGNSNTLFGEIATVMDIPQPKIPPCEPWTLTEQLDFEKEVTGIFMSGHPLDHFKFEM
KHYGIMPMQAFNEEKESTTLMARGRQYRLAGLVIDANERITKTGRNFGVLVLEDYSGKSE
FMLWGDDYMRFKDYLVKGKNLFLTGFFKQRFNTDNYEFKIERITLLESVKQNLTKQLILD
MEARHVSPEIINFLQGQVEKSGGQGGVTVRFNIFEPRTRNRISLYSIDKGIEMSDELTAW
LQENPDLEVQVVTN
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagttttcacacctccattgccatacgcagtattccttgctggatggggccgca
tccatccaggacatgtacaagaaggccatcaaggaagaaatgccagctattgccattacc
gaccatggtaatatgtttggggcattcgagtttgtatcagaagcgtataagcataagggt
gaggacggcaaacccagggtaaaacctattgtgggctgcgagttctatgtggtgaaggat
cgccaccaaaagacctttaccaaggagcagaaggatgagcgttaccaccaggtattgctg
gccaagaatgccaagggctaccagaacctgatcaaactcacctcactgggctatactgaa
ggcatgtatagcaagtaccccaggatcgacaaggaactgatcgagaaataccacgaaggc
ctgatcgctaccacctgttgtattggcgcctatgtaccccaaaccattttgcacgatggg
gaggatgccgctgaaaaggaattcaaatggtggctcgatatctttggggaagactacttt
attgaactgcaaaggcacaatctcaaagaacaggaattgatcaaccaggtcctgctgaag
tttgcagtcaaattcaatgtcccggtcattgccaccaatgacagccattatacggatcgg
gatgactccaatgcgcacgatatcctgctctgcatcaataccggtgaaaagcagagtact
cccggtttcgacgatttcgtgaatgatgatacccatatcaagaacaggcgattcaaattc
ccgaacgaccagttctatttcaagggtacccaggagatgaaggaacttttcaaggatgtt
cctgaggccatcgacaacactaatatgatcgttgaccgggtggagttactcaacctgaaa
aaggatatcctgcttcccgccttccccatcccgaaggaattccaggtacatgatgatgcc
aacctgaaccagtgggaatacctgaagcaccttacctacgagggtgctaaaatgcgctat
acagacattacccctgatatccaggaacgattggactttgaattgttcaccatcaaaacg
atgggatttgcaggttacttcctgattgtgagtgactttatcagggctggtcgtgacctg
ggcgtattcgtcggcccaggtcgtggatcggcagcgggtagtgcggtggcctactgtata
ggcatcaccaatattgaccctatcaagtacaacctcctgttcgagcgtttcctgaacccc
gacaggaaaagcatgccggatatcgataccgactttgatgatgacggccgccagcgcgtg
atcgattatgtggtgcagaaatacggtaagaaccaggtagcgcagatcgtaacctatggt
acgatggccgccaaaatgagtatcaaggatgtggccagggtgctcgaccttcccctggca
gaatccaatgccctggcgaaaatggtcccagaaaaaccaggcattgaattgggcagggtg
ctcaccgccccactcaccgccaaggaaggggaaaaatcactggaagcgaaagagggcctg
ggccccgaggacctggaaagtgtacgcaaactgcgggagatttaccatggtaccgacctt
cgggctcaggtgctgaaggaagctgaaaggctggaaggctcagtgcgcaataccggtata
catgcggcgggtattatcattgcgcctgacgacctcatgaacatcataccggtatgtacc
gccagagattcggaacttttggtcacccagatagagggcagcatcattgaggaagctggt
gttatcaagatggacttccttggccttaagaccctgaccatcatcaagaatgccttgcag
atgatcagggagaaccatggggtggaaattgagatcgacaatattccccttgacgacctg
aagacttttgaactctatcaacgcggtgataccatcggcacgttccagttcgaaagcccg
ggaatgcagaaatacctgcgggacctcaaacctgaccaatttgcggaccttattgccatg
aacgccctgtaccgtcccggtccaattgcctatatccccaacttcatcgaccgtaagcat
ggaagggaagccatcacttatgacttacctgaaatggaagagtacctgaaggagacctat
ggtatcaccgtttaccaggagcaggtaatgttgctcgcccaaaagctggcaggatttacc
aagggtgatgccgacgtattgcgtaaggcaatgggtaagaagcaaaaagccgtactggat
aaaatgaaggcccagttcgtggagggcgccagcgctaaaggacatcccaaggataaactg
gagaagatatggaccgactgggaagcatttgcccagtatgcgttcaacaagtcgcactcc
acctgttatgcattcgtggcctaccagaccgcctacctgaaagcccactacccttccgaa
tacatggccgcggtactcaacaacgccggcgccattgaaaagatcacctttttcatggaa
gaatgtaaacggatgggcctgaatgtactcggaccagatatcaatgaatcccaaaagggc
tttgcggtcaaccaggccggtgatatccgttttggcctcggcggtctgaaaggcgtggga
gaagcgggcgtggaaagcatcatccacgacaggaaacaaaatggcccattcagctcggta
tttgacctggttaaaagggtcaaccaacgtactgtcaacaaaaagaccatggaaaacctg
gtgtatgccggtgcatttgattgtttccccgaattacaccgtgcacaatacttttttacc
ccacccggtgataataccaatggactggagaagatcatcaaatacggtaatatttaccag
gcccagagcacgggcaacagcaatacacttttcggggagatagccaccgttatggacatc
ccacaacccaagataccaccttgtgaaccatggacccttaccgaacaactcgactttgag
aaagaagtgacgggcatctttatgagcggtcacccccttgatcatttcaaattcgaaatg
aagcattacggtatcatgcccatgcaggccttcaatgaggaaaaggaatccaccaccctc
atggccaggggcaggcaataccgtttagctggactagtgatagacgccaatgagaggatc
accaagacaggcaggaactttggggtattggtactggaagattattccggtaagtcagaa
ttcatgctttggggggatgattacatgcgcttcaaggactacctggtaaagggtaagaac
cttttccttaccggattcttcaagcagcgattcaataccgataattacgagttcaagatc
gaaagaatcaccctactggagagcgtaaaacaaaacctcacgaagcaattgatccttgac
atggaggccaggcatgtctccccggaaatcatcaacttccttcaggggcaggtggaaaaa
agcggaggccagggaggggttacggttcgttttaacattttcgaacccaggacccgtaac
cggatcagcctgtacagcattgacaagggaattgaaatgagtgacgaattgacggcctgg
ctgcaggaaaatcccgatctggaggtacaggttgtcacaaattaa
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