Flavihumibacter rivuli: KJS94_10000
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Entry
KJS94_10000 CDS
T08011
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv00300
Lysine biosynthesis
flv00470
D-Amino acid metabolism
flv00550
Peptidoglycan biosynthesis
flv01100
Metabolic pathways
flv01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KJS94_10000
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KJS94_10000
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KJS94_10000
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KJS94_10000
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flv01011
]
KJS94_10000
Enzymes [BR:
flv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
KJS94_10000
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
KJS94_10000
Peptidoglycan biosynthesis and degradation proteins [BR:
flv01011
]
Precursor biosynthesis
Amino acid ligase
KJS94_10000
Racemase
KJS94_10000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ULQ54970
LinkDB
All DBs
Position
complement(2270525..2273002)
Genome browser
AA seq
825 aa
AA seq
DB search
MNYTISSIAALLNARWQAMAEDGTIDHLLYDSRQLLFPATTLFFALKSKRRDGHDFIPSL
YQQGVRNFVVSDVTAFGEIPGSNVLVVDDVLKALQQLATFHREQFHIPVIGITGSNGKTI
VKEWLNQLLEPDQLIVRSPRSYNSQIGVPLSVWAMTSAHRLGIFEAGISQPGEMAALAGI
IQPTIGILTNIGDAHQEGFPSLEQKLREKALLFRKVEKLVYGIDNDLVRKVMKEAGVSGA
QHFTWGRAAGADLRILEVSLQAGFSIAQLEYRSIPFSLRIPFTDAASIENAFTCTATMLC
MGYTVETIAERIPGLHAMAMRLELKEGIGNCSVINDSYSADLGSLRIALDFLSQQQQHKK
KTVILSDIPESGISPEQLYTRVAGLLKQHKVGRLIAIGPVIGNYLGLMEQLSGSTVQHYL
STDDLILAFHTLRFQDETILVKGARSFSFEQVSSMLEQQVHETVLEIDLNAMLHNLKQYQ
QVLHPSTRLMAMVKAFSYGSGSFEIANLLQFHKVDYLAVAYTDEGAVLRKGGIHLPIMVM
NTEPSSFDAIVQHNLEPVVYSLPFFRAFDQFLKQEGLTQYPVHLELETGMNRLGFMPGDL
PALLEMLPHSNFKVQSVFSHLVASEDPAEDAFTNLQAERFLETCRSLEKILPYSFIRHLE
NTAAIFRHPQWQFDMVRLGIGLYGVDPAVDGKLSLQEVSTLKSTIAQVKHLEPGDTVGYN
RRGKIEKTSTIATVRIGYADGYYRRLGNGVGKMLVKGKLAPVIGTVCMDMTMIDVTGIEG
VREGDEVVVFGKGLSVQTVAQWAGTIAYELMTSVSHRVKRVYFQD
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaactataccatcagttcaattgcagctttattgaatgcccgctggcaggcaatggca
gaggatggtactattgaccacctcttgtatgacagcaggcaattattgtttcccgccaca
accttgttcttcgcccttaaaagcaagcgtcgcgatggccatgattttatcccttcgctc
taccaacagggcgtccggaattttgtggtcagtgacgtaactgcctttggagaaattccc
ggatcgaacgtgctggtggtagatgatgtgctgaaggccctgcagcaactggctaccttc
caccgtgaacaattccatattcccgtcatcggcattaccggcagcaatggcaagaccatc
gtcaaagaatggctgaaccaattgctggaaccggatcaactcatcgttagaagtccgcgc
agttacaactcccagataggcgtgcccctgagtgtttgggcaatgaccagcgcccaccgg
ctgggtatttttgaggcaggcatatcccaacccggtgaaatggctgcattggccgggatc
atccaacctaccattggtatactcaccaatattggtgatgcacaccaggaaggtttccct
tcccttgagcaaaagctcagggagaaagccttgcttttccgcaaggtggagaagctggtt
tatggtatcgacaatgacctggtgcgaaaggtaatgaaggaagcaggggtatcaggtgcc
caacattttacctgggggcgtgcagcaggtgccgacctgaggatccttgaggtatccctc
caggccggtttttccatagcccaactggagtatcggtcaatcccattcagcctgaggatc
ccctttacagatgcggcttctattgagaatgcctttacctgtaccgccacgatgctatgc
atgggttataccgtggaaacaattgcggaacgcataccgggtctgcacgctatggccatg
cgtttggaattgaaggaagggatagggaattgttcggttatcaatgacagttattcggcc
gaccttggttccctgcggatcgccctggatttcctgagccagcaacaacagcacaagaag
aagaccgtcatcctttcggatattcctgaatcaggaatatcaccggagcaactttatacc
agggttgccgggttattgaagcagcataaggttggccgcctgattgctattggtcccgtc
atcggtaattaccttggcttgatggagcaactgagtgggtcaaccgtgcagcattacctt
tcaacagatgacctgatccttgccttccataccctcaggttccaggatgaaaccatcctg
gtgaagggtgcgcggagtttttcctttgaacaggtgagcagcatgctggagcagcaggtg
catgaaacggtactggagatcgacctgaatgccatgttgcacaacctgaaacaataccag
caggtgctgcatccttccaccaggctgatggccatggtgaaggcattttcctatgggagc
ggaagttttgagatcgccaacctgctgcagttccataaggtggattacctggccgtggcc
tataccgacgaaggtgcggtgctccggaaggggggtatccatttacccatcatggtgatg
aataccgagcccagcagttttgatgccattgttcagcataacctggagccggtggtctat
tccctgccatttttcagggcctttgaccaattcctgaaacaggaagggttgacacagtat
ccagtccacctggagctggaaaccggtatgaaccgtttgggattcatgcccggcgacctg
cccgccctgttggaaatgctgccccattccaatttcaaggtgcaatcggtcttcagccat
ctcgttgctagtgaagatcctgctgaagatgcattcaccaacctgcaagctgaaaggttc
ctggagacctgtcgttcactggaaaagatcctgccctatagttttatccgtcacctggaa
aatactgccgccatcttccgtcatccccaatggcaattcgatatggtaaggttgggcatt
ggcctgtatggagttgaccctgccgttgatggcaagctatccttgcaggaagtatctacg
cttaagtcaaccattgcccaggtgaagcacctggagccgggggatacagtagggtataac
cgcaggggaaagatcgaaaaaacctccaccattgcaaccgtaaggatcggttatgccgat
ggctattatcgcaggctgggcaatggggtagggaagatgttggtgaagggcaaactggcg
cctgtgatcgggactgtttgtatggatatgaccatgatcgatgtcaccggcatcgaaggg
gtaagggaaggggatgaggtggtggtctttggcaaaggcctctccgttcaaaccgttgcg
caatgggcgggtactatcgcttacgaattgatgacaagcgtttcccaccgggtgaaaagg
gtttatttccaggattaa
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