Flavihumibacter rivuli: KJS94_10915
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Entry
KJS94_10915 CDS
T08011
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
flv
Flavihumibacter rivuli
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flv03019
]
KJS94_10915
03009 Ribosome biogenesis [BR:
flv03009
]
KJS94_10915
Messenger RNA biogenesis [BR:
flv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KJS94_10915
Ribosome biogenesis [BR:
flv03009
]
Prokaryotic type
rRNA processing factors
KJS94_10915
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Ortholog
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GFIT
Motif
Pfam:
RNase_E_G
PIG-L
DnaJ_CXXCXGXG
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ULQ55151
LinkDB
All DBs
Position
2542917..2544467
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AA seq
516 aa
AA seq
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MNKELIINSAPQGVEIALLEDKKLVELHNEKADASFAVGDLYLGKVRKLIPGLNAAFVDV
GFEKDAFLHYTDLSPYAKSLLKFTQQSISDNSPEGFDFGKFEVEPEIIKTGKINEVLGGK
PNILVQILKEPIAAKGPRLSCEISLPGRFVVITPFNDVVAVSRKIHSSDERKRLQRIIES
IKPKNFGVIVRTAAEGKNTAELHEDLKALVDTWAAIQRNLKSSQAPAKILSEQTKTTSIL
RDLLNEDFNRIVVNDRNIYNDTKSYIQRIAPDKTDIVSYYHNGSPIFDQYGVTKQVKAAF
GKTVNLPSGAYLIIEHTEALHVIDVNSGYKSVSNNQEQNALETNLEAAEEIARQLRLRDL
GGIIVVDFIDMKLPENKKRLADAMEQFMKPDRAKHAVLPISKFGLMQITRQRMKPEININ
TMEVCPSCHGTGKISSTLVLEDEIEKNLNYLITHSHSNLTVAVHPILYAYLTKGWIFSKL
WKWRRAFKQKIKLVANTNYHLTEFHFFDAHEEEIKL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaggaattaattattaactcggcaccacagggtgttgagattgcattgctggaa
gacaaaaagctggtggaactgcataatgaaaaagcagatgccagttttgcggtcggagac
ctctacctaggaaaggttagaaagctcattcccggtttgaatgctgcatttgttgatgta
ggattcgaaaaggatgcttttttgcattataccgaccttagcccttacgccaagtccctc
ctcaagttcacccagcaatccatcagcgacaatagcccggaaggtttcgacttcggaaag
ttcgaggtagagcccgagatcatcaagacaggtaagatcaatgaagtattagggggcaaa
cctaatatcctcgtacagatccttaaggagcctattgctgccaagggaccgcgactgagt
tgcgagatctccctgcccggccgtttcgttgtgatcacccccttcaatgatgtggtggcc
gtctccaggaagatccattcatccgatgagcgcaaacgcctccagcgcatcatcgaatcc
atcaagcccaagaacttcggtgtaattgtccgtacggccgctgaaggcaagaatacggct
gaattgcacgaggacctgaaggcattggtagatacctgggcagccatccaacgcaacctg
aaaagctcacaggccccggccaagatattgagtgaacaaaccaagaccaccagtatcctc
cgcgacctgctgaacgaggatttcaaccgcatcgtggtgaacgacaggaatatctacaac
gataccaagagttatatccagcggatcgccccggacaaaaccgatattgtttcctattac
cacaatggctcgcccatttttgaccagtatggggtaaccaagcaagtcaaggctgccttt
ggtaaaacggtcaacctgcccagcggcgcctacctcatcattgagcatacggaagcactt
catgtgatcgacgtaaatagtggctataagagtgtaagcaataaccaggagcagaacgcc
ctggagaccaacctggaggctgcagaagagatcgccaggcagttgaggctgagggacctt
ggtggtatcatcgtggtggatttcattgatatgaagctgccggagaacaagaagcgcctg
gccgatgccatggagcagttcatgaagcccgacagggccaagcatgccgtactgcccatt
tcaaaattcggcctgatgcagatcacccgccagcgcatgaagcccgagatcaacatcaat
accatggaggtttgccccagttgccatggtacgggaaagatctcctctacccttgtcctg
gaagatgagatcgaaaagaacctcaattacctcattacccatagccatagcaaccttacc
gtggctgtgcatcccatcctttatgcctacctgaccaagggctggatcttcagcaagctt
tggaaatggagaagggcattcaagcaaaagatcaaattggttgccaataccaattaccac
cttacagagttccatttcttcgatgcccacgaggaagagatcaagctctaa
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