Flavihumibacter rivuli: KJS94_12435
Help
Entry
KJS94_12435 CDS
T08011
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
flv
Flavihumibacter rivuli
Pathway
flv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJS94_12435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flv03021
]
KJS94_12435
Transcription machinery [BR:
flv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJS94_12435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
UPF0122
HTH_38
HTH_28
PhyR_sigma2
HTH_DeoR
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
ULQ55450
LinkDB
All DBs
Position
complement(2926206..2926775)
Genome browser
AA seq
189 aa
AA seq
DB search
MAEELPYSYDEMAADFRAGKESAYDHFFRQYHAPLCYMAYRILQDQQAAEDVVQDCFLKL
WLQRHQMQDTRQVVAYLYTTVRNAAIDAQRKGNVRDRNEAAYANLTDSPVSLADDHLLIE
AETLRRLYSSIDQLPPRIREVVELHFLQDKSYREISELLQTSPETIRKQKARALAILKQL
LMFCLFFSR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagcttccttattcttatgatgaaatggcggcagatttcagggccggaaag
gaatcggcttatgatcattttttccgccaataccacgcaccgctttgctatatggcctat
aggatcctccaggatcaacaggcggctgaagatgtggtacaggactgctttctcaagcta
tggctccagcgccatcagatgcaagatacccgccaggtagtggcttatctctatactact
gtccgcaatgcggctattgatgcccaacggaaaggcaatgtcagggataggaatgaagcg
gcttatgctaaccttaccgactcaccggtaagcctggccgatgaccacttacttattgag
gccgaaacacttcgacgcctatatagtagtatagaccaacttcctcccaggatccgcgaa
gtggtagaacttcatttcctgcaggataagtcctatcgggagatcagtgaactgctgcag
accagcccggaaaccatccggaagcaaaaggcaagggcgctagccattctcaaacaatta
ttgatgttttgcctatttttttcccgctag
DBGET
integrated database retrieval system
