Flavihumibacter rivuli: KJS94_13135
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Entry
KJS94_13135 CDS
T08011
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv03030
DNA replication
flv03410
Base excision repair
flv03420
Nucleotide excision repair
flv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJS94_13135 (polA)
03410 Base excision repair
KJS94_13135 (polA)
03420 Nucleotide excision repair
KJS94_13135 (polA)
03440 Homologous recombination
KJS94_13135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flv03032
]
KJS94_13135 (polA)
03400 DNA repair and recombination proteins [BR:
flv03400
]
KJS94_13135 (polA)
Enzymes [BR:
flv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJS94_13135 (polA)
DNA replication proteins [BR:
flv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KJS94_13135 (polA)
DNA repair and recombination proteins [BR:
flv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KJS94_13135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KJS94_13135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Transposase_20
HHH
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ULQ55589
LinkDB
All DBs
Position
3084348..3087179
Genome browser
AA seq
943 aa
AA seq
DB search
MDKRLFLLDAMALVFRAYYALIRNPRITSQGRNTNAQFGFTNTLLDLINNQKPTHMAVCF
DTEAPTERHIDFTDYKANRQEAPEDLILALPDIKRIIRGFNIPVVEVDGYEADDVIGALS
KQAEAAGYEVFMVTPDKDYGQLVSDKVKIYKPGYQGGDVEILGPEEVCNKWNIKSVDQVI
DMLGLMGDAVDNIPGIPGVGEKTAAKLLAEYGTLENILENADQIKGALGEKVRNGKESAM
VSKKLATIITAVPVEFHEEDFRLKEWNKDALKEVFTELEFRTVAKRILGEEILSPNATKS
APQGVQTDLFGNAVDTPASKLAKPAENDDSQEKFLSVDKNIANTSHHYELIQGEDAIEAL
VRKLAEAPEICFDTETTNLDANDAELVGLSFASRAHEAYYIPCPADQVQTKKILTQLGPL
FSDKNKRWIGQNIKYDLLVLKWYGVELAGSIFDTMLAHYVIEPEGKRGMDLLSAKYLGYE
PVHIEELIGKKGKNQGNMRDVELEKIKDYAAEDADITLQLKQVFEPMLKQLEVEKVFEKV
ENPLVKVLADMEFEGVKVDVDFLNEYSKQLERDAKAAEERVYQQAGVRFNLASPKQLGEV
LFEKLQLDPKAKKTKTGQYATGEDVLLKLAQQNPIVDDILAYRELTKLKSTYVDALPQMI
NRKTGRVHTSYGQAIAVTGRLSSNNPNLQNIPVRTERGREIRKAFVPRDGQHILLSADYS
QIELRIVAAISGDKNMCEAFRSGKDIHTATAAKVYGVPEEEVTKEQRYKAKSVNFGIIYG
QGAFGLADNLGISRTEAKEIIDNYKKEFSGITSYMDNMVNFARERGYVETLMGRKRWLRD
INSSNFTVRGFAERNAINSPIQGTAADMIKLAMASLHAAIKREKLRSKMILQVHDELVFD
ALKEEVDSLKPLILDCMQSALPLPNEVPVIAEVGMGDNWLEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataaacgcctttttctattggatgctatggccttggttttcagggcttactatgct
ttgatccgcaacccgcgcattacttcacagggcaggaataccaatgcccaattcggattt
accaacacactcctggacctgatcaataaccagaaaccgacccatatggcggtttgcttt
gataccgaagcacccacagaacgccatatcgactttactgactacaaggccaaccggcag
gaagcgcctgaagaccttatccttgccttacctgatatcaaaagaatcatcaggggtttc
aatatcccggtggtggaagtagatggttatgaagctgatgatgtcattggtgcccttagt
aaacaagcagaagctgctggttatgaggtgtttatggttaccccggacaaggattacggt
caactagtatccgataaggttaagatctacaagcctggttaccagggaggggatgttgag
atcctcggccctgaagaggtatgtaataaatggaatatcaaatcagtggaccaggtgatc
gatatgctgggcctgatgggggacgcggttgacaatatccccggcatacccggtgtaggg
gaaaagaccgccgccaaactattggccgaatacggcaccctcgaaaacatcctggaaaat
gcagatcagatcaagggagcgctcggtgaaaaggtaaggaatggtaaggaatcggccatg
gtttccaagaaattggccaccatcatcactgccgtcccggtagaattccacgaagaggac
ttcaggctcaaggagtggaataaggatgccttaaaggaagttttcaccgaactggaattc
cggacggttgccaaaagaatccttggcgaagagatcctgtccccgaatgctacgaaatct
gccccacagggtgtccagaccgacctctttggtaatgctgtcgacacccccgccagcaaa
ttggcgaagccagctgaaaatgacgattcgcaggaaaaattcctgtctgttgataaaaat
attgccaatacctcccatcattatgaattgatccagggtgaagatgccattgaagccctg
gtaaggaaactggctgaagcccccgagatctgtttcgataccgaaaccaccaacctggat
gccaatgacgccgaactcgtaggcctgagctttgcttccagggcacacgaagcctattat
atcccctgtccggcagaccaggtacaaaccaaaaagatcctcacccagcttggtcccctg
ttcagtgataagaacaaacgctggatcggccagaatatcaaatatgacctgctcgtcctg
aaatggtatggggtggaactcgccggaagtattttcgataccatgttggcccattatgta
attgagcccgaagggaagaggggaatggacctgctgagtgccaaatacctgggctacgaa
cccgtgcatatcgaggaactgattggtaagaaggggaagaaccagggcaatatgcgggat
gtggaactggaaaagatcaaggattacgctgcagaggatgctgatatcaccctccagttg
aagcaggtctttgaacccatgctgaagcagctggaagtagaaaaggtttttgaaaaagta
gagaaccccctggtaaaagtgctggccgacatggagtttgaaggggtaaaagttgatgtt
gacttcctgaatgaatattctaaacagctggaaagggatgccaaagcagcagaagaaagg
gtataccagcaggcaggggtccgcttcaacctggcgtcccccaaacaactgggagaagtc
ctgtttgaaaagcttcagctcgatcccaaagctaaaaagacaaagaccggccaatatgca
accggggaagatgttctgctgaaactggcccaacaaaacccgatcgtggacgatatcctc
gcctacagggaactgaccaagctgaaatccacctacgttgacgcgctgccccaaatgatc
aaccgaaagactggaagggtacacacttcctatgggcaggccatagccgttacaggcagg
ctatccagcaataaccctaacctccagaacatacctgtccggacagaaaggggcagggag
atcaggaaagcattcgttccacgggatgggcagcatatcctgctttctgcggactattcc
cagatagaacttaggattgtagcggccatcagcggggacaagaatatgtgtgaggccttc
cgcagtggaaaggatatccatacagcaactgccgccaaagtgtatggtgtaccggaggag
gaagtaaccaaagagcagcggtacaaggccaagagcgtgaatttcggcatcatctatgga
cagggcgctttcgggcttgccgataacctgggcatcagccggacagaagccaaggagatc
atcgataattataagaaagagttcagcggcatcaccagctatatggacaatatggtcaat
tttgcccgtgaacgtgggtatgtggagaccctgatggggaggaagcgatggctcagggat
atcaactcgagcaactttacggtcaggggatttgcagaaagaaacgcgatcaattcaccg
atacagggtactgctgccgatatgatcaaactggccatggccagtctccatgctgcgatc
aagagggaaaaattaaggagtaaaatgatcctgcaggtgcatgatgaattggtctttgat
gcattgaaagaagaggtggattccctcaaacccctgatcctcgactgcatgcaatcggct
ttaccattgcccaatgaagtgccggtcatcgcggaggtcggaatgggtgacaattggctg
gaagcacattaa
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