Flavihumibacter rivuli: KJS94_13450
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Entry
KJS94_13450 CDS
T08011
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJS94_13450 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flv03019
]
KJS94_13450 (recQ)
03400 DNA repair and recombination proteins [BR:
flv03400
]
KJS94_13450 (recQ)
Enzymes [BR:
flv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KJS94_13450 (recQ)
Messenger RNA biogenesis [BR:
flv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KJS94_13450 (recQ)
DNA repair and recombination proteins [BR:
flv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KJS94_13450 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ-1-like_HTH
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
HTH_40
HMG_CoA_synt_N
Motif
Other DBs
NCBI-ProteinID:
ULQ55652
LinkDB
All DBs
Position
3156043..3158328
Genome browser
AA seq
761 aa
AA seq
DB search
MATTTRSRKTAASAPKAKKTASKSTTSTYSSEQLLEALQEHFGFNQFKGQQEAAIQSLLS
GKDTFVIMPTGGGKSLCYQLPAMIKDGVAIIVSPLIALMKNQVDLVRSYSSKDDVAHFLN
STLTKKEIREVHDDLLTGRTKMLYVAPETLTKQENLEFFSDLNISFFAVDEAHCISEWGH
DFRPEYRRLREMMDQISPEVPVVALTATATPKVQSDIVKNLGLREPNIFISSFNRHNLYY
EIQPKIKKEQTIKSIVKYIVSLKGKSGIIYTLNRKTTEELADVLVANGIKAVAYHAGLDS
KLRAERQDMFLNEDVQVIVATIAFGMGIDKPDVRFVIHYNIPKSIENYYQETGRAGRDGL
EGNCILYYSHKDVAKLEHLMRDKPLSEREVGAQLINETVAYAESGVCRRKILLSYFGEEW
TDKNCGNCDNCRNPKEQVEAKENAVKVLKVVKALDERFATDYVVNILTGKLTPNIKMFRH
DGLAEFGIGKDEADHYWNSLVRQLLLAGYLSKDIEEYGVLKLTKNGEAFMKKPKSFKIIL
NNLFEDANEDDDEGVETGGGSATATDEKLFEMLKELRQKEAKRKSLPPFVIFLETSLQDM
ATLYPTTVQELEKCQGVSKGKAIRYGKPFVELIAKYVEENNIEKPDEFVMKSVVNKSGLK
VYIIQQTDKKIPLETIAKNKDLRLDALLEEMETIAASGTKLNLDYAIDEMLDEYDQEEIL
EYFKGCETSSLQVALEELAESNYTWEQLKIMRIKFLAQYGM
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgactacaagatccaggaaaaccgcggcttcagctccaaaggctaagaagacg
gcatccaaatccaccacatctacatacagctccgaacaactgctggaagccctgcaggag
cattttggtttcaatcaattcaagggccagcaggaagcagcgatccagtcgctgctcagc
ggcaaggatacctttgtaatcatgcccaccggtggcggtaagagcttgtgttaccagtta
ccggccatgatcaaggatggggttgcgatcattgtatcgcccctgatcgccctgatgaag
aaccaggtagacctggtgaggagttacagcagcaaggatgatgtggcccatttcctgaac
tccacccttaccaagaaggagatcagggaagtgcacgatgacctgctgaccggcaggacc
aagatgctgtatgtggcacctgaaacccttaccaagcaagagaaccttgaatttttcagt
gacctgaatatttcctttttcgccgttgacgaggcccactgtatctcagaatggggacat
gatttccgcccggaataccgtcgccttcgtgaaatgatggaccagatcagcccggaagtg
ccggtggttgcccttacggcgaccgccacccccaaagtgcagagtgatattgtgaagaac
ctgggccttcgcgaaccaaatatctttatttcttccttcaacaggcataacctctattac
gagatccagcccaagatcaagaaggaacagaccatcaagagcattgtaaaatatattgtc
agcctgaagggaaagagcggtatcatctataccctgaaccgcaagaccaccgaagaactg
gccgatgtgctggtggccaatggcatcaaggcggtggcctaccatgcgggactcgacagc
aaactgagggcagaacgccaggatatgttcctgaacgaggatgtccaggtgatcgtggcg
accatcgcattcgggatgggcatcgacaagccggatgtgcgtttcgtgatccattataat
atccccaagagcatcgagaactattaccaggaaacaggtcgtgccggtcgtgatggactg
gagggcaactgtatcctgtattattcccataaggatgtggccaagctggaacacctgatg
cgcgacaagcccctgagcgagcgcgaagtgggcgcccaactcatcaatgagaccgtggcc
tacgcagaaagcggtgtctgcaggcggaagatcctgctgagctattttggagaggagtgg
accgataagaactgcggcaactgcgataattgcaggaaccccaaggagcaggtagaagct
aaggagaatgccgtgaaggtgttgaaggtggtgaaggccctggatgagcgcttcgcgacc
gattacgtggtgaatatcctgaccggtaagctgacccccaatatcaagatgttcaggcac
gatggcctggccgagttcggcattggtaaggatgaggccgaccattactggaattccctg
gtgaggcagctgctgttggcagggtacctttccaaggatattgaagaatatggggtgttg
aagctgaccaaaaatggcgaagccttcatgaagaagcccaagagcttcaagatcatcctg
aacaacctgttcgaggacgccaatgaggacgatgacgaaggcgtagagaccggcggcggt
tccgcaacggctacggatgaaaagctgttcgagatgctgaaggagctccgccagaaggag
gcgaagcgtaagagcctgccaccattcgtgatcttcctggaaacctccctgcaggatatg
gccaccctctaccctaccacggtgcaggagctggagaaatgccagggcgtgagcaagggc
aaggccatccgttatggtaagccattcgtggagcttatcgctaaatatgtggaggagaac
aatattgagaagcccgatgagttcgtgatgaagagcgtggtgaacaagagcgggctgaaa
gtatacatcatccagcagaccgataagaagataccgctggagaccattgcgaagaacaag
gacctgaggctcgatgccttgctggaggaaatggagaccatcgcggccagcggcaccaag
ctgaacctggactatgccattgatgaaatgctggatgaatatgaccaggaggagatcctg
gaatatttcaagggttgcgagacctcatccctgcaggtagccctggaggaactggcggaa
agcaattatacctgggagcagctgaagatcatgcgcatcaagttcctggcgcagtatggg
atgtaa
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