Flavihumibacter rivuli: KJS94_14150
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Entry
KJS94_14150 CDS
T08011
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KJS94_14150 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flv03400
]
KJS94_14150 (xseA)
Enzymes [BR:
flv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KJS94_14150 (xseA)
DNA repair and recombination proteins [BR:
flv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KJS94_14150 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
DUF6990
Motif
Other DBs
NCBI-ProteinID:
ULQ55787
LinkDB
All DBs
Position
complement(3321377..3322774)
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AA seq
465 aa
AA seq
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MIKLTLEDAFARQSFWVVADVTSHNFYYQKGYHYFDLVEKDKRSNQILAKLSTTAWGTGS
QRIKAFEQETGQRFTNDIQVLVKVAVEYHPVYGLKLNLLDIDARFTLGAIEQQRQATLER
LLKECPQDVRRIGEQYHTSNQSLQLNKVIQYIAVLSSSSSAGYQDFIHTLSHNPYGYTFH
AELFHTVVQGEFNAEAINMKLQQIRKSGRHYDAVVIIRGGGAQTDFLVFDQFPLAKTVAQ
FPIPVITGIGHQKNETIVDLMAHTATKTPTKAAELIIQHNASFEAELVTAQRDIIIKCQQ
LLHREARAVNTIHHNVINLSRDLLDNQRYSLGRLQQDLGTQARQLLFDNRSALNNAASLV
SRKPLSMLAVEQQQIIHYKERLKLLMKQYLRNRKQDLEHRISLFRMASPEQIMKRGFALV
KVDGKITANPDQIEPGQTISVILSATEIKAIVESKKLYDGPAIDL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaactgaccctggaagatgcttttgcgcgccaaagcttctgggtggtggccgat
gtgaccagccataatttctattaccagaaaggctatcactattttgacctggtggagaag
gacaagcgatccaaccagatcctcgccaaactctccactacggcatggggcactggctcc
caaaggatcaaggcctttgaacaggaaacaggacagcgattcaccaatgatatccaggta
ttggtaaaagtggctgtggaataccacccggtttatggcctgaagcttaacctgctggat
atcgatgcccggtttaccttgggtgctatcgaacagcaaagacaggccacactggaacgc
ttgttgaaagaatgcccccaggacgttcgaaggatcggggaacaataccataccagcaac
cagtcgctgcaattgaacaaggtgatccagtacattgccgtactgagttccagctcttca
gccggctaccaggatttcatccacacactttcgcataacccttatggttataccttccat
gcggagctttttcatacggtggtgcagggcgagttcaatgcggaggcgatcaatatgaaa
ctgcagcagatcaggaaaagcgggcgccactatgatgccgtggtgatcatcaggggcggc
ggtgcacaaaccgacttcctggtattcgaccagttccccctggccaagacagtggcgcaa
ttccccattcccgtgatcaccggtatcggtcaccaaaagaatgagaccattgtggacctg
atggcacataccgccaccaaaacccccaccaaagcggcggaactcattatccagcacaat
gccagttttgaggcagaactggttacggcccagcgggatatcatcatcaaatgccagcaa
ttgctgcatcgcgaagcaagggcggtcaacaccattcaccacaatgtgatcaacctttca
cgcgacctgctcgacaatcaacggtattcactgggcagactacaacaggacctgggcacg
caagcgcgacaactgctgtttgataacagatcagcattgaataacgcagcctcactggta
agcaggaaaccgttgtcgatgctggcggtagaacaacaacagatcattcactataaggag
cggttaaaactgctcatgaaacaatatctccgcaacaggaaacaggacctggagcaccgg
atcagtttgttcaggatggcttcaccggaacagatcatgaagaggggttttgccctggtg
aaggtggacggcaagatcacggccaaccccgaccagatcgagccgggacaaaccatcagc
gtgatcctgtcggcaacggagatcaaagcaattgtagaatcaaaaaaattgtacgatgga
ccagcaattgacctatga
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