Flavihumibacter rivuli: KJS94_15525
Help
Entry
KJS94_15525 CDS
T08011
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv03420
Nucleotide excision repair
flv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KJS94_15525
03430 Mismatch repair
KJS94_15525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flv03400
]
KJS94_15525
Enzymes [BR:
flv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KJS94_15525
DNA repair and recombination proteins [BR:
flv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KJS94_15525
MMR (mismatch excision repair)
Other MMR factors
KJS94_15525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
ResIII
AAA_11
Hydrolase_6
AAA_7
DEAD
ARM_ECM29_C
Motif
Other DBs
NCBI-ProteinID:
ULQ56058
LinkDB
All DBs
Position
3659284..3661626
Genome browser
AA seq
780 aa
AA seq
DB search
MQDYLKGLNDRQREAVLHKDGPIMIVAGAGSGKTKVLTTRIAHLMAHYKVDAFNILALTF
TNKAAKEMKERIEKILGNSDARNLYVGTFHSVFARILRSEAHRLGYPNSFTIYDTDDAKG
VVKTVINEMNLDDKLYKPNIVYNRISSAKNALVGPAEYAQDYYIQQEDARSNRPAIAQIY
ANYAKRCFKNGAMDFDDLLIKMYELLKHFPEALVKYQHKFRYILIDEYQDTNPAQYEIIK
LLGAAHENVCVVGDDAQSIYSFRGATIQNILQFQKDYDDVKVIKLEQNYRSTKSILHVAN
EVINNNKGQIPKQLWTDNGEGEKIRLVRTMTDNDEGKFVADTIQEQKLRNHYNNKDFAIL
YRTNAQSRAFEESLRRMAIPYTMYGGVSFYSRKEIKDMVAYLRVIVNPRDEEALKRIINY
PVRGIGKTTIDKVLLIANNSNISMWEVLERAAEAGFKAGTLESIENFVTMIKSFQSMLQI
KNAYDVAFHVGKQTNLVKELFNDKSAEGVQRYENVQELLNSIKEFTETPSNDDGEVGDKG
LAAYLQQITLLTDADEKDPNADTVKLMTIHAAKGLEFPVVFAAGLEEMLFPNAMSINTRE
ELEEERRLFYVVITRAKQRLWITYANTRYRFGQLVQNEPSRFIDEIPQNYLDRSYAGGGA
RNSGTQFGGTSAFDRMRGFGASEAAERMYGPPPAKRKDTVPSYVPPKPAPKVVEHKPSAD
FVPSDTSNLQAGQKVEHQKFGFGVVTKMEGSSHNPVATVQFDLNGEKKIMLNYAKLRIVE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattacctgaaaggattgaatgaccggcagcgtgaggcggtgttgcacaaggat
ggcccgattatgatcgtggccggtgccgggagcggaaagacaaaagtattgaccacccgt
attgcccacctgatggcccactataaggtggatgcctttaatatattggcgcttacgttc
accaataaggcggccaaagaaatgaaggagcgtatcgagaagatccttggtaattccgat
gcccgtaatctttatgtgggcaccttccatagtgtcttcgcccgtatcctgcgcagcgaa
gcccatcgactgggttatcccaactcctttaccatttacgacactgatgatgccaagggc
gtggtgaagaccgtgatcaacgaaatgaacctggacgacaagctgtataagccgaatatc
gtttataaccgtatatcatcggcaaagaacgctttggttggtccggctgaatacgcgcag
gattattatatccagcaggaggatgcccgcagcaaccgtccggcgatcgcccagatctac
gcgaactatgccaagcgctgtttcaagaatggcgcaatggatttcgatgacctgctgatc
aagatgtacgaattgctgaagcatttcccggaagcgctggtgaagtaccagcataagttc
aggtatatcctcattgatgagtaccaggataccaacccggcccagtacgagatcatcaaa
ttattgggtgccgcacatgagaatgtttgtgtggtgggcgacgatgcccagagtatctac
tctttccgcggggcgaccatccagaatatcctgcagttccagaaggattatgatgatgtg
aaggtgatcaagctggagcagaattaccgcagtaccaagagtatcctgcatgtggccaat
gaagtgatcaacaataacaagggacagatacccaagcagctctggaccgataatggcgaa
ggggagaagatcaggctggtgcgtaccatgaccgataacgatgaaggaaaattcgtggcg
gatacgatccaggagcagaagctaaggaaccactacaacaacaaggacttcgcgatcctt
taccggaccaatgcgcagagccgggcttttgaagaaagtcttcgccggatggctattccc
tatactatgtatgggggtgtgagtttctattcccgcaaggagatcaaggacatggtagct
tacctgcgggtgatcgtgaatccccgtgacgaagaagcattgaagcggatcatcaactac
ccggtaaggggtatcggaaagaccactatcgataaggtgttgctgatcgcgaacaacagc
aatatctccatgtgggaggtattggaacgtgctgctgaagccgggttcaaagccggtacc
ctggagtcgatcgagaacttcgttaccatgatcaagagcttccagagcatgttgcaaata
aagaatgcctatgatgtggccttccatgtgggtaagcagacgaacctggtgaaggagctt
ttcaatgataagagtgctgaaggggtgcaacggtatgagaacgttcaggagttattgaac
agtatcaaggagtttaccgaaactcccagcaatgatgatggggaagtgggtgacaaaggg
cttgcggcctacctgcagcagatcaccctgttgactgatgcggatgagaaagaccccaat
gctgatacagtgaaattgatgaccattcacgccgctaaaggcctggagttcccggtggtt
ttcgcagctggattagaagaaatgttgtttcccaatgcgatgtctatcaacacaagggaa
gagctggaagaagaacgtcgccttttctatgtggtgatcaccagggccaagcaaaggctt
tggataacctatgccaatacccgctatcgttttggacaattggtgcagaatgaacccagc
cggttcattgatgagatcccccagaattaccttgacaggagttatgccggcggtggtgca
cgcaatagcggtacccagtttggagggacatcggcgtttgacaggatgcggggttttggc
gccagtgaagccgcagagcgtatgtacggtccgccgcctgccaagcggaaagataccgta
ccatcctacgtgcctcccaagccagcgccaaaggtggtggagcataagccttctgctgat
ttcgttcccagtgatacatccaatctccaggcaggccaaaaggtagaacaccagaaattc
ggtttcggggtggtgaccaaaatggaaggcagttctcataaccctgtagcaactgtacag
tttgacctgaatggagagaagaagatcatgctgaattacgcaaaactcaggattgtggaa
tga
DBGET
integrated database retrieval system
