Flavihumibacter rivuli: KJS94_16960
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Entry
KJS94_16960 CDS
T08011
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv00550
Peptidoglycan biosynthesis
flv01100
Metabolic pathways
flv01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KJS94_16960 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KJS94_16960 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flv01011
]
KJS94_16960 (mrdA)
Enzymes [BR:
flv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KJS94_16960 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
flv01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KJS94_16960 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ULQ56342
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All DBs
Position
3996654..3998741
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AA seq
695 aa
AA seq
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MSVFNQSRSTVIRLIMAGVFLVIIAQLVNLQLFSSKYKALALNNAVYPKVKYPDRGIIYD
RKGRAILNNTIMYDLEVTPSQVKGVDTFLLCRLLEIDTAEFKKRIITSIIKNGRYRPSVF
EDLLPESVHARLEENIYKFPGFSLVERPVRTYPFKAAAHIMGYIGEADSSIIKRSDGFYR
LGDYVGRSGLEQYYEKVLMGKRGVEYMIKDNKNRLVGKYENGQFDTAAVAGRNLRTYIDV
EVQQLAEKLMTNKVGAVVAIEPKTGGIIAMTSGPNYDPNLLTGPEKQKNFNKLFLDVSSP
LLNRAIKGQYPPGSTFKPLGALVALDEGVITPSFGIGCGGAYYGCARPVKCTHSGGGHAA
NLRLAIANSCNSYFSHIYRLAVDADKFGGVKKGYQHWKEYMNAFDLGVRVGVDLPSEDKG
NIPDSSVYNKVYRNSWNSCTNLTLGIGQDMMLSTPLQLANAMCIIANKGYYYTPHFVEKF
DNETKEDTLLNKYRVKHEPLTRIPDEAFEAVIAGMQDVVEIGTARVAKIPGINVCAKTGT
AENYRVIDGKRTKLKDNSVFVCFAPRENPKIAIAVIVENAGFGATWAGPIAALMMEKYLN
DTLRPERVKEVDRIASANLMPGWLVREQFKQDSIRAYNWYKLTKDSTVLRRFMRSGQPKL
DTGKAPKPKPPIGRVAFLKPEAILPEKQKHKQQAT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtattcaatcaatccagaagtactgtaatcaggctgatcatggccggggttttc
ctggtcatcattgcgcaattggtgaacctgcagttattctccagtaagtataaggcgctt
gcgcttaataatgccgtatacccaaaagtgaagtacccggacagggggatcatttatgac
cgtaagggaagggctatcctgaacaataccatcatgtatgacctggaagtcaccccttcc
caggtaaaaggcgtggatactttcctgctatgccgcttgctggagatcgacacagcagaa
ttcaagaaaaggatcattacatccattatcaagaacggacgttaccgtccaagtgtattt
gaggacctgcttcccgagagtgtacatgcccgcctggaagagaatatttacaagttcccc
ggcttcagcctggtggagcgtcctgtgcgtacctatccattcaaggctgctgcccatatc
atggggtatatcggcgaggccgactccagcatcatcaagcgttctgatggcttttaccgc
ctcggtgattatgttgggagaagcggactggaacagtactatgagaaagtgttgatgggt
aagcggggtgtggagtacatgatcaaggacaacaagaacaggttggtgggcaaatatgag
aatgggcagttcgatacggcggctgtggcgggaaggaacctccggacctatatagacgtt
gaggtacaacagctggctgagaaactgatgacgaacaaggtgggtgcggttgtggccatc
gaacccaagacgggtggtatcatagccatgacttccggacccaactatgaccccaacctg
ctgaccggacccgagaagcaaaagaacttcaacaagcttttccttgatgtgagcagtcct
ttgctgaacagggcgatcaagggccagtatcctccaggttctacctttaagcccttgggt
gccctggtagcgctggatgaaggggtgatcacaccttcgtttggtataggttgcggaggt
gcttattatggatgtgcgcgcccggtaaaatgtacccactccggtggcggacatgctgcc
aacctgcgcctggccatcgccaactcctgtaactcctacttctcccatatctaccggtta
gcagtagacgctgataaattcggtggcgtgaagaagggctaccagcactggaaagaatac
atgaatgcatttgacctgggcgtaagggtaggggtcgacctgccgagtgaggataagggt
aatatccccgactcctccgtttacaataaggtctatcgcaattcctggaattcctgtacc
aacctcaccctcggcattggccaggatatgatgttgtcgaccccgctacagttggccaat
gccatgtgcatcatcgccaacaaaggctattactatacgccgcattttgtggagaagttc
gataacgagaccaaggaggataccctgctgaacaaatacagggtaaagcatgaacctttg
acccggatccctgatgaggcctttgaggcagtaatcgccggtatgcaggatgtggtggag
atcggtacggccagggtggcgaagatcccgggtatcaatgtatgtgccaaaacaggtacg
gcagagaactacagggtgatcgacggaaagcgcaccaagctgaaggataactccgtattc
gtatgctttgccccaagggagaatccaaagatcgcaatcgcggtgatcgtggagaacgcc
ggtttcggtgcaacatgggcaggacccattgccgccctgatgatggagaaatacctgaat
gatacccttcgcccggaaagggtgaaggaagtggataggatcgccagtgctaacctaatg
ccgggttggctggtaagggagcagttcaagcaggattccatcagggcttataactggtac
aagctcacaaaggattctaccgtgttgaggcgcttcatgaggtctggccagcctaagctc
gatacaggcaaggcgccgaaaccaaagccgccaataggacgcgtggccttcctgaagccg
gaagctatcctgccggaaaaacaaaaacataaacagcaagctacatag
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