Flavihumibacter rivuli: KJS94_18135
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Entry
KJS94_18135 CDS
T08011
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv00260
Glycine, serine and threonine metabolism
flv00460
Cyanoamino acid metabolism
flv00630
Glyoxylate and dicarboxylate metabolism
flv00670
One carbon pool by folate
flv00680
Methane metabolism
flv01100
Metabolic pathways
flv01110
Biosynthesis of secondary metabolites
flv01120
Microbial metabolism in diverse environments
flv01200
Carbon metabolism
flv01230
Biosynthesis of amino acids
flv01240
Biosynthesis of cofactors
flv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KJS94_18135
09102 Energy metabolism
00680 Methane metabolism
KJS94_18135
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KJS94_18135
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KJS94_18135
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KJS94_18135
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KJS94_18135
Enzymes [BR:
flv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KJS94_18135
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
SLC25_like
Motif
Other DBs
NCBI-ProteinID:
ULQ56575
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Position
complement(4284853..4286133)
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AA seq
426 aa
AA seq
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MQHDALVFDLIRKELDRQRHGIELIASENFTSLQVMQAMGSVLTNKYAEGYPGRRYYGGC
EIVDQTEQLAIDRIKQAFDCEYANVQPHSGAQANAAVMLAILQPGDKILGLDLSMGGHLT
HGSAVNFSGKLYQPFFYGVEKETGLVDYAMLEKVAREEKPKLIICGASAYSRDWDYARIR
KVADEVGAFVLCDMAHPAGLIAKGLLSSPFEHCHFVTSTTHKTLRGPRGGIILMKKDFEN
PFGLKDVKGNIRMMSNLLDMAVFPGTQGGPLEHVIAAKAVAFGELLSDEFTTYAQQIVKN
AQAMSTALVDRGYKIISDGTDNHLMLIDLRNKNISGKKAEQVLGKADITLNKNMVPFDDK
SAFVTSGIRVGVPAITSRGMKEEHMEFVINAIDKVLMNADDEAIIAAVRKSVNEFMGQFP
LYPELG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgatgccctggttttcgacctcatccgcaaggaattggatcgccaacgtcac
ggaattgaattgatcgcttccgaaaacttcacctcactgcaggtaatgcaggcaatggga
agtgtattgaccaataaatacgctgaaggttaccccggacgcaggtattatggcggttgt
gagatcgttgaccagaccgagcaactggcaatcgaccgcatcaagcaggcatttgactgt
gagtatgcgaacgtacagccccatagtggtgcccaggccaatgctgcagtaatgctggcc
attctccaacccggggacaagatcctgggcctagacctgagcatgggcggacacctgacc
catggttcagcggtaaacttctcaggaaaactttaccaacccttcttctacggtgtggaa
aaagagactggcctggtggattatgccatgctggaaaaagttgcccgcgaggaaaaaccc
aaactgatcatctgtggcgcttctgcctacagccgtgactgggattatgcccgcatccgt
aaggtggcagacgaggttggcgcttttgtgctttgtgatatggcgcatcctgcaggcctg
atcgctaagggattgcttagctctcccttcgaacattgtcattttgttacttctactacc
cataaaacattgcggggtcctcgcggcggtatcatcctcatgaaaaaggacttcgagaac
cccttcggcctgaaagatgtaaaaggcaatatccgcatgatgagcaacctgctggatatg
gctgttttccccggcacccagggcggtccgctggagcatgtgatcgctgccaaagctgta
gcctttggggaattgctgagtgatgaattcacaacctatgcccagcagatcgtgaagaac
gcccaggctatgtcgacagctttggttgacaggggttacaagatcatcagtgatggaacc
gacaaccacctgatgctgatcgaccttcgcaacaagaatatcagtggtaaaaaggccgaa
caggtattgggcaaggcggatattaccctgaacaagaatatggtaccatttgatgacaag
agtgcattcgtgacctcgggtatcagggttggtgtgccggccattaccagccgtggcatg
aaagaagaacatatggagtttgtgatcaacgccattgacaaggtattgatgaatgcagat
gacgaagccatcattgcagccgtaaggaaatcagttaatgaattcatgggacagttccca
ttgtatcctgagttaggataa
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