Fulvivirga ligni: LVD16_01360
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Entry
LVD16_01360 CDS
T09288
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_01360
Transporters [BR:
flw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LVD16_01360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C39
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39_2
AAA_22
ABC_ATPase
AAA_14
AAA_29
AAA_21
RsgA_GTPase
AAA_23
DUF3335
MobB
AAA_15
AAA_16
nSTAND3
AAA_25
AAA_30
AAA_28
ATPase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UII21881
LinkDB
All DBs
Position
complement(298299..300485)
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AA seq
728 aa
AA seq
DB search
MRFPNYRQLDTMDCGPTCLRIVAKHYGKNYSLQSLREKSHLTREGVSLLGISDAAESIGF
RTLAAKIQFDKLQEEAPTPFIAHWRQRHFIVVYGFRKNKVLVSDPAHGLVKLSKQEFLDG
WLSDSEKNSEIGVVLFLEPSPSFYEADGEKVNRSGFQFLFKYLRPYKKFIVQLFLGMILG
SILQLIFPFLTQSIVDVGIANQDLNFVTLILIAQLMLFFSRTAVEFIRGWILLHLGTRIN
ISILSDFLIKLMRLPLSFFDSKMIGDLLQRIGDHSRIEAFLTSTTLNVLFSFVNLLIFGV
VLAIYDLRIFWVFLIGSGFYVMWILIFMKKRRNLDYKRFDQMSINQSSLIQLITGMQEIK
LHNSEKQKRWEWERIQAKLFKVSIKGLALNQYQQAGSFFINELKNILITFLAAKAVVTGE
ITMGMMLAIQYIIGQLNAPLNQLVSFIHTAQDAKISLERLGEIHNQEDEEDEDDKKVDIF
PEDLSLKLENVQFQYKGPHSENVLDDVSFNIPEGKITAIVGASGSGKTTLIKLLLKFYEP
TQGEIKLGDINLSNYGNRMWREECGAVLQDGFIFSDSIAKNIAVNDEIIDKEKLLYATRV
ANIQDFIKVLPLGYNTKIGSDGHGLSQGQRQRILIARAVYKNPRYLFFDEATNALDANNE
KIIMKNLDEFFSGRTVIVVAHRLSTVKNADQIIVLNNGRIEESGTHNELADKKGAYYELV
KNQLELGQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttccaaattacagacagttagataccatggactgcggtcctacttgccttaga
attgtagctaagcattatggcaaaaattactccttacagtcattaagggagaaaagccat
ctaacgcgcgagggggtttctttacttggtataagtgatgctgctgagtcaatagggttt
cgtacactggcagctaaaatacaatttgataaacttcaagaagaggctcccactccattt
atagctcattggagacagaggcattttattgtggtatatggattccgaaagaataaggtt
ttggtttcagatccggcacatggtttagtgaaacttagtaagcaagaattccttgatggg
tggcttagtgattccgaaaagaattcggaaattggtgtggtgctttttttggagccttca
ccaagtttttatgaggcggacggagaaaaggtaaatcgctcgggatttcaattcttattt
aaatatttaaggccatacaagaaatttatcgtccaactattcttagggatgatattagga
agtattcttcaattaatatttccatttctcacacagtccattgtggatgttggtattgcc
aatcaggatttaaattttgtaactctgattttaattgcacagctaatgttattttttagc
cgtacagcagtggagtttatacgaggttggatcttattgcatttgggtactagaatcaat
atttcgattctttccgattttttgataaaactgatgaggttgccattatcattttttgat
tctaaaatgatcggtgatcttttacagcgtataggtgatcatagtagaatagaggctttt
cttacatcaactactttaaatgttctgttttcattcgttaacctcctgatttttggagta
gtgctagctatttatgacttaaggatattctgggtgttccttattggaagcggcttttat
gttatgtggattttaatattcatgaagaaaagacgaaatcttgattataaaagatttgat
caaatgtcaattaatcaaagcagcctgatacagcttataactggcatgcaagagattaaa
cttcataatagcgagaaacaaaagagatgggagtgggaaaggatacaggcaaaattattc
aaggtgagtataaaggggctagcactaaatcaataccaacaggcgggctcatttttcatt
aatgagttaaaaaatattttaataacgtttttggctgcgaaggcagtggtgaccggtgaa
attacaatgggtatgatgctggccatacaatatatcataggccagttaaatgcgcccttg
aatcagcttgttagttttatacatacagctcaagatgccaaaattagtctcgaaaggctg
ggtgaaattcataatcaggaagatgaggaagatgaagatgataaaaaggtggatatattt
cctgaagatctttcgctgaagttggaaaatgttcaattccagtataaaggtcctcattct
gagaatgtcttagatgatgtgagctttaatataccagagggcaagataacagccattgta
ggagctagtggaagtggaaaaactactttgatcaagctcctcttaaagttttatgagcca
actcaaggagagatcaaactgggagatattaatctgagcaattatggtaatagaatgtgg
agagaagaatgtggtgctgttttacaagatggattcatcttttcagattcaatagcaaaa
aacattgcagtgaatgatgaaataattgacaaagaaaaattgctttatgccaccagagtt
gcaaatattcaggatttcataaaagtattgcctctggggtataatactaaaattggtagt
gacggtcatgggctaagtcaaggacagcgccaaagaattttaatagctcgagccgtttac
aaaaaccctcgctatctcttctttgatgaagccacaaatgctttggatgccaataacgaa
aaaataataatgaagaatttggacgaattcttcagtggcagaactgtgatagtggtggca
cataggttaagcacagtaaaaaatgctgatcagataattgttttgaataatggaagaata
gaagaaagcggtacccataatgagcttgcagataaaaagggagcatattatgagttagta
aagaatcaattagaactagggcaatga
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