Fulvivirga ligni: LVD16_01550
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Entry
LVD16_01550 CDS
T09288
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flw03021
]
LVD16_01550 (nusA)
03009 Ribosome biogenesis [BR:
flw03009
]
LVD16_01550 (nusA)
Transcription machinery [BR:
flw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LVD16_01550 (nusA)
Ribosome biogenesis [BR:
flw03009
]
Prokaryotic type
rRNA transcription factors
LVD16_01550 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_2
KH_NusA_C
KH_1
S1
KH_KhpA-B
AF1548-like_C
DUF1108
Motif
Other DBs
NCBI-ProteinID:
UII21918
LinkDB
All DBs
Position
complement(342752..343993)
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AA seq
413 aa
AA seq
DB search
MDTGILIESFADFAKQKNIDRPTMIRILEDVFRTMIRKRFETDENFDIIINADKGDLEIW
RFREIVDDNSEDIWDHDKISLSKARKIEPDFEIGEEVAEEITLEDFGRRAVMTARQTLIQ
KVKDLEKDILFQKYKDLVGEIISGEVYQILSREVLLTDGEGNEISIPKNEQIPKDRFRKG
DPVRAIVDRVEMINGNPKIILSRTSPVFLERLFESEVPEVYDGLITIKRVVREPGERAKV
AVESYDDRIDPVGACVGMKGSRIHSIVRELQNENIDVINFTDNMDLYIARALSPAKISSI
KISEEDGRVSVYLKPDQVSLAIGKGGQNIKLASKLVGLEIDVFRELGEFEEEDVDIDEFV
DEIEDWVLDELKRVGLDTAKSVLALSKEELERRTDLEEETINNVMAVLKQEFE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggataccggtatattaatcgagtcatttgcagattttgcaaaacaaaaaaatatagat
aggcctacgatgattcgtattcttgaagacgtattcaggactatgatccgtaagagattt
gagaccgatgagaattttgacatcattatcaatgccgataaaggagatttagaaatctgg
agattccgtgaaattgttgatgacaacagtgaagatatttgggatcatgacaagattagt
ttaagcaaggcacgtaaaatagagcctgattttgaaataggagaagaagtggcagaagaa
atcacacttgaggatttcggaagaagagcggtaatgactgcccgtcagacacttattcag
aaagtaaaagatcttgagaaggatattttattccaaaaatataaagacctggtaggagag
attatctctggagaggtttatcaaatattaagtagagaagtactacttacagatggagaa
ggaaacgaaatctctatccctaagaatgagcaaataccaaaagacagattccgtaaagga
gatcctgttagagctattgtagaccgtgtggaaatgattaatggtaatcctaagattatc
ttatcaagaaccagcccggtattcttagaaagattattcgaaagtgaagtgccagaggtt
tatgatggccttatcactataaaacgtgtagttcgtgagccaggagagagagcaaaagta
gctgtggaatcttatgatgatagaatagatccggtaggtgcttgtgtgggaatgaaaggt
tctcgtattcacagtattgtaagagaattacaaaatgaaaatattgatgttatcaacttc
acggataacatggacttgtacatcgccagagcgttaagccctgctaaaatttcaagtata
aaaattagtgaagaggatggtagagtttcagtatatctgaagccagaccaggtgtctttg
gccattggtaaaggtggtcaaaatattaagttggctagtaagctggtaggtttagagatt
gatgtattcagagaattaggagaatttgaagaggaggatgttgatatcgatgaattcgtt
gacgaaattgaagactgggtgcttgatgaattaaagcgtgtgggtcttgatactgcaaag
agcgtattggcactatccaaagaagaactcgaaagaagaaccgatttagaagaagaaact
ataaacaatgtgatggcggttcttaagcaggagttcgagtaa
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