Fulvivirga ligni: LVD16_01660
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Entry
LVD16_01660 CDS
T09288
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
flw03009
]
LVD16_01660 (rimO)
Enzymes [BR:
flw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LVD16_01660 (rimO)
Ribosome biogenesis [BR:
flw03009
]
Prokaryotic type
ribosomal protein modification factors
LVD16_01660 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UII21939
LinkDB
All DBs
Position
complement(373915..375231)
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AA seq
438 aa
AA seq
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MKTKGRKKDKVNIVTLGCSKNLVDSEVMLTQLRGNKINATHEDKNDDANVVIVNTCGFID
NAKQESIDTILRYADAKEEGLIEKLYVTGCLSQRYKDDLEQEIPQVDAFFGTMELPFLLK
KFKADYKQELVGERILTTSNHYAYVKIAEGCDRPCSFCAIPLMRGKHVSKPIEQLVTEAK
NLAKNGTKELLLIAQDSTYYGLDIYGKRNLADLLKHLSDVEGIDWIRLHYAFPTGFPMDV
MDVMAERSNICNYLDMPLQHGSTRVLKDMRRGTTREKQEALIHAIRERVPNIALRTTLIA
GYPGETEAEFEEMYDFVERMRFERLGIFTYSHEENTHAYNFVDDVPDEVKQDRANAVMEL
QEGISYELNQQRIGQTYKVLVDRMESGKFIGRTEFDSPEVDNEVIIDNKDGHIRLGDFVQ
VKIEDATEFDLYGSVAKD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaactaaaggtagaaagaaggataaagtaaacatcgtaacactgggttgctccaaa
aacctggtagattctgaagtaatgcttacgcagcttcgtggcaacaagattaatgccact
catgaagataagaacgatgatgctaatgtggtgattgtgaatacatgtggatttattgat
aatgccaagcaggagtcaatagataccatattaagatacgcagatgcaaaggaagaaggg
cttattgaaaagctctatgtaactggctgtctttctcagcgctataaagacgatctggag
caggaaataccacaggtagatgccttctttggaacaatggagcttccttttctactcaag
aaatttaaggcagattataagcaggagttggtaggcgaaagaatccttactacttctaat
cattatgcttatgtaaaaatagccgagggttgtgatagaccttgttctttctgtgctatt
ccattaatgcgaggaaaacacgtttctaaacctattgaacaactggttactgaagcgaag
aacctggccaaaaatggcactaaggagcttttactaattgcacaggattctacttactat
ggattagatatctatggaaaaagaaatctggccgatcttcttaagcatttatcagatgta
gaaggtatcgactggataaggttgcactatgctttccctacaggtttccctatggatgtt
atggatgtaatggccgagcgttctaatatctgtaattatttagatatgcctttgcagcat
ggctctaccagagttttgaaagatatgcgtagaggtaccactcgtgaaaagcaagaggca
ctgattcatgccattagagaaagagtgccaaatatagcattacgaactacactgatagcc
ggttatcctggagaaacagaagcggagtttgaagaaatgtatgactttgtggagagaatg
agatttgaaagattaggaatcttcacctattcacatgaagaaaacacccatgcatataat
tttgttgatgatgtacccgatgaggtgaaacaagatagagctaatgccgtaatggaatta
caggaaggaatttcctacgagctaaaccagcagcgtattggccagacttataaggttctt
gttgatagaatggaaagcggaaaattcataggcagaacagagtttgattctcctgaggtg
gataatgaagtgatcatagacaacaaagacggacatataaggctaggtgattttgttcag
gtaaaaatagaagatgccacagaatttgatttatacggaagtgttgcgaaagattaa
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