Fulvivirga ligni: LVD16_03720
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Entry
LVD16_03720 CDS
T09288
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
flw
Fulvivirga ligni
Pathway
flw00061
Fatty acid biosynthesis
flw00071
Fatty acid degradation
flw01100
Metabolic pathways
flw01212
Fatty acid metabolism
flw02024
Quorum sensing
flw04146
Peroxisome
Module
flw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LVD16_03720
00071 Fatty acid degradation
LVD16_03720
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LVD16_03720
09145 Cellular community - prokaryotes
02024 Quorum sensing
LVD16_03720
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
flw01004
]
LVD16_03720
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flw04147
]
LVD16_03720
Enzymes [BR:
flw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LVD16_03720
Lipid biosynthesis proteins [BR:
flw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LVD16_03720
Exosome [BR:
flw04147
]
Exosomal proteins
Exosomal proteins of breast milk
LVD16_03720
Exosomal proteins of breast cancer cells
LVD16_03720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UII22337
LinkDB
All DBs
Position
complement(834544..836295)
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AA seq
583 aa
AA seq
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MDVKRLFDVLLFQIEDRPQDICLSHKINNQWKSYSTKETMEIVNQLSTGLLSLGVQPGDK
IGLASFNRPEWVFADFAISQIGAINVPMYPNSTSEDYAFIIEHAEIKVVLAGDIEIYRKF
EEAQKSVNHSLTLFCFDEENETIHWQKLLEQGENIDQIEKLRAPIQYEDLATIIYTSGTT
GNPKGVMLSHKNILSNAAAVSEVFAVGGPEHRTLSLLPLSHIFERTALYVYMQMGVSIYY
AESMDTIADNMKEVKPHFFATVPRLLEKIYEKILMKGYELTGIKKNLFFWALELAKNNRL
GENQGAWFNMQLGLANKIIFSKWREALGGEVQFIVSGGAALQPRLVNIFWAAQIHVLEAY
GLTETSPGISFSKIDDLKVGCVGPLLTGVQVKIAEDGEILAKGDNIMMGYYKRQDLTDEV
IDQEGWFHTGDIGEMVDNHFLKITDRKKEMFKTSGGKYIAPQALENKFAESLLIEQIMVI
GEGQKFPAALIVPSFEKLKSWCQIHNINYTTDKEMVDNPEVINKFQKEVDNLNASFAQYE
KIKKFWLLSQPWTIEKGEITPKLSMKRKIIKQNYQSEIDSIYS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaaagactttttgatgtactcctgtttcaaattgaagacaggccgcaagat
atatgtttatcccataaaattaataatcaatggaaatcctactccactaaggagacgatg
gaaattgtgaatcaattgagcaccggtcttttatccttgggagttcagccaggagataaa
attggcctggcttctttcaatcggcccgaatgggttttcgcagattttgctatttcacaa
atcggtgccattaatgtgccgatgtatcctaactccacttctgaagattatgcttttatc
atcgagcacgcggaaattaaagtggtccttgccggagatatagaaatctaccgaaaattt
gaagaagctcagaaatcagtgaatcattcattaacccttttttgctttgatgaagagaat
gaaaccatacattggcaaaagttattggagcagggtgaaaatatcgatcagattgaaaaa
ctaagggcgccgattcaatacgaagatctagcaactatcatctacacttctggaactaca
ggcaatccgaaaggggtaatgttgtctcataaaaacattctctcaaatgcagccgctgta
agcgaagtttttgccgtgggtgggcccgagcatcgaactttatctttactccctctaagc
catatctttgagcgcacagcgctgtatgtttatatgcagatgggagtgtcaatttactac
gccgagagtatggacaccattgccgacaatatgaaagaggtgaagccccacttttttgct
acagttcctcggctattggagaagatttatgaaaaaatattaatgaaaggttatgagctc
acaggcattaaaaaaaaccttttcttttgggcgctggaattagctaaaaataatcgtctt
ggtgaaaaccagggagcctggttcaatatgcagctggggctggccaataaaattatattc
agcaagtggcgagaggccttgggtggggaagttcaattcatagtttccggtggtgcggcg
cttcaaccaagattggtaaatatattttgggcggcacagattcatgtgctggaagcctat
ggccttaccgaaacttctccaggaataagctttagtaaaatagatgatctgaaagtgggc
tgtgtagggccgttactcacaggtgtgcaggtaaaaattgctgaggatggagagattttg
gcaaaaggtgataatatcatgatgggttattacaaaaggcaggatttaactgatgaagtc
attgatcaggagggttggttccataccggtgatattggtgaaatggtggataaccacttt
cttaaaattaccgataggaaaaaggaaatgttcaaaaccagtggtggtaaatacatagct
ccgcaggccttggaaaataaatttgccgagtcactgctgatagaacagatcatggtgatt
ggcgaaggacagaaatttcctgctgctctaattgtgcccagttttgaaaaactaaagtcc
tggtgccaaattcataacatcaactacactactgataaagaaatggtggataacccggag
gttatcaacaaatttcaaaaagaagtggataacctcaacgcttctttcgctcagtacgaa
aaaataaaaaaattctggttgctatcgcaaccatggaccatcgagaaaggtgaaattacg
ccaaaactgagcatgaaaagaaaaattataaaacagaactatcagtcggaaatagacagc
atttatagttaa
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