Fulvivirga ligni: LVD16_04675
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Entry
LVD16_04675 CDS
T09288
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flw03400
]
LVD16_04675 (radA)
DNA repair and recombination proteins [BR:
flw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LVD16_04675 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
AAA
ChlI
AAA_24
AAA_22
AAA_5
AAA_16
AAA_14
nSTAND3
NACHT
CobU
NTPase_1
ABC_tran
GvpD_P-loop
RUBY_RBDX
RuvB_N
Rad51
Lon_C
DUF7129
DNA_III_psi
SLFN-g3_helicase
RsgA_GTPase
MCM
DUF7125
TIP49
DZR
ATPase_2
AAA_18
ATP-synt_ab
Viral_helicase1
AAA_29
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
UII24325
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Position
1050154..1051536
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AA seq
460 aa
AA seq
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MAKAKTLFFCQNCGYESAKWLGKCPSCGTWNSFVEELTKSKSTSADKNEWRARGGRPAAA
PKKVAEITHERELRINSKNSELNRVLGGGIVPGSVVLIAGEPGIGKSTLMLQIALTVNCK
VLYVSGEESEQQIKMRADRLDSMKLAADECYILAETDTNDIFTQAEELKPDVLILDSIQT
LHSANVESAAGSVSQVKQCTAELIKFAKETNTPVFLVGHITKEGAIAGPKVLEHMVDTVL
QFEGDRHLSYRILRTTKNRFGSTSELGIYEMLGSGLREVSNPSEILISQKEGDLSGVTIG
ATIEGNRPLMIEIQSLVSTAAYGTPQRSSTGFEPRRLNMLLAVLEKRCGFRLGLQDVFLN
MAGGIKVEDPAIDLAVCCAVVSSLEEISIPEKACFAAEVGLGGELRAVNRIESRIAEAEK
LGFEEIYISKFGMKGAEQSKFKITIKPFAKINDVFSDLLG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcaaagaccttatttttctgtcaaaactgcgggtatgagtctgcaaagtgg
ctagggaagtgcccttcttgcggtacttggaatagttttgtagaggaattaaccaagagt
aaatctacttcagctgataaaaatgaatggcgtgctcgtggtggcaggcctgcggcggca
cctaaaaaggtggctgagataacccatgagcgcgaactacggatcaactcaaaaaatagt
gagctcaatagggtccttggaggaggaattgtgccaggttctgtcgttctgattgccggt
gagcccggtatcggtaagtctacattaatgcttcagatagctttaacggtgaattgcaaa
gtgctttatgtatctggtgaggaaagtgagcagcaaataaaaatgcgtgctgataggctg
gatagcatgaaattggccgctgatgaatgctatattcttgctgaaactgatacaaatgat
atttttacgcaggccgaggagctaaagcctgatgtacttattttagattcaattcagacc
ctgcattctgctaacgtagagtctgcggcagggagcgtgagccaggtgaaacagtgtaca
gccgagcttatcaagtttgcgaaggagaccaatacacctgtttttctggtgggacatatt
actaaggaaggggctattgccgggccgaaggttctggaacatatggtagacacggttctg
caatttgaaggggacagacatctttcttatagaattttaagaactacaaaaaaccgtttt
ggatctacctcagaattaggtatttatgaaatgttgggctccggccttcgagaggttagc
aatccatctgaaatattaatatctcaaaaagaaggcgatctaagcggggtgacgataggg
gccaccattgagggtaacaggcctttgatgattgaaattcagtctttggtgagcacggct
gcttatggcacacctcagaggagctccactggttttgagcctcgtaggctcaatatgcta
ttagcggtactggagaaacgctgcggctttagacttggattacaagatgtattcttaaat
atggctggcggtataaaggtagaagacccagctattgatttggctgtttgttgtgcagtg
gtttcctctctagaggaaatttccatacctgagaaagcttgctttgctgcagaagtgggg
cttggaggcgaattgagagcagtgaatcgtattgaaagtcgaatagctgaagcagagaaa
ttgggttttgaagaaatttatatctcaaagttcggaatgaagggggcagagcaatcaaaa
tttaaaattacaattaaaccattcgctaaaatcaatgatgtttttagtgatttgttagga
tag
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