Fulvivirga ligni: LVD16_04785
Help
Entry
LVD16_04785 CDS
T09288
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
flw
Fulvivirga ligni
Pathway
flw03030
DNA replication
flw03410
Base excision repair
flw03420
Nucleotide excision repair
flw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVD16_04785 (polA)
03410 Base excision repair
LVD16_04785 (polA)
03420 Nucleotide excision repair
LVD16_04785 (polA)
03440 Homologous recombination
LVD16_04785 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flw03032
]
LVD16_04785 (polA)
03400 DNA repair and recombination proteins [BR:
flw03400
]
LVD16_04785 (polA)
Enzymes [BR:
flw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVD16_04785 (polA)
DNA replication proteins [BR:
flw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LVD16_04785 (polA)
DNA repair and recombination proteins [BR:
flw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LVD16_04785 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVD16_04785 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
IMS_HHH
RNase_H_2
HHH
Motif
Other DBs
NCBI-ProteinID:
UII22542
LinkDB
All DBs
Position
complement(1073245..1076040)
Genome browser
AA seq
931 aa
AA seq
DB search
MSKPEKKLFLLDAYALIYRAHFAFSKSPRISSKGINTGVMFGFTNTLLEVIQKQKPTHIA
VAFDTSAPTFRHEQYKEYKANREETPEDIKVGIPIVKDIVRAFNIPVIELDGFEADDIIG
TLSKKAAENDFEVFMMTPDKDYGQLVQEHVYLYKPAYMGNAVDILGVDEVLKKWDIESVD
QVRDMLGLQGDASDNIPGIPGIGPKTASKLIKQFGSVENLVQNADQLKGKQKENVENFGA
QGVLSKELATINVEVPVDFNEEDLVYTGPEKEKLQPIFEELEFRTLLKRVFNEEMKSSSA
TSSSAGQLSMFSQESKEAIEIEEEIITAKDTIKTIEHEYHLITTPEKRKELVAYLKKQKE
FCFDTETTDIDAVEAEVVGLAISYLKGEAFYVSVPENKEEATAVLNDFKEILEDSKIGKI
GQNLKYDILVLKKYGINVKGQIFDTMLAHYLLEPETKHSMDVIAEQYLHYIPIPISDVLG
PKGKKQLNMRDLDPKDVVEYAGEDADITLQLKVRLDEEINKEGLDKLLNDVEHPLVQVLA
QMEYEGVKIDESALHDMSKELQEASLEAQNEIFELAGQEFNIASPKQLGEVLFDKLKLMD
KPKKTKSGQYATGEEILSRLAGEHKICSRILDFREYQKLKSTYVDALPKMISGDGRVHTD
YGQAVAATGRLSSNNPNLQNIPIRTEKGREIRKAFVPRDENHALLAADYSQIELRIAASF
AQDKDMISAFKEGRDIHATTAAKVFNVALEDVDPNMRRKAKEVNFGIIYGISAFGLSQNL
NIPRSEASDIIKSYFKEFPSIRAYMDDSIQKAKEKEYVETLMGRRRYLRDINSRNATMRG
YAERNAINAPIQGSAADIIKVAMVKIHEWLQKENLKTKMIMQVHDELVFDVPKDELDIVK
PKIVELMTSAVDLEVPMEVEAGVGENWLKAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccggagaaaaaattatttctacttgacgcttacgcgttaatttacagagca
cattttgcatttagtaaaagcccaagaataagctcaaaaggtataaatactggagtgatg
tttggctttaccaacaccctgttggaagtaattcaaaaacaaaagccaacccatattgcg
gtagcttttgacacctcggcccctaccttcagacacgagcaatacaaagaatataaagct
aatagagaggaaactccggaggatattaaggtgggcattcctatagtgaaagatattgta
agggcttttaacattccggttatagagctagacggttttgaggctgatgatatcattgga
acattatctaagaaagccgctgaaaatgattttgaggtgtttatgatgacaccagataag
gattacgggcagctggttcaggagcatgtttatctctataaacctgcctacatgggcaat
gctgtagatattttaggcgttgatgaggttctgaaaaaatgggacatagaatcagtagat
caggtaagagatatgcttggtttacaaggcgatgcatctgataatataccaggtatacca
ggcataggccctaaaactgcctccaaactcattaagcaatttggctcggttgaaaacctg
gtgcaaaacgctgaccagctaaaaggaaagcaaaaagaaaatgtagaaaactttggtgct
cagggagtgctttccaaagaattagctacgatcaatgtagaggtacctgttgattttaat
gaggaagatctggtatatacaggccctgaaaaagagaagcttcaacctatttttgaagaa
ctggaattcaggacattactaaaaagagtcttcaatgaagagatgaaatcttcaagtgcc
acttcatcttcagcagggcagctttctatgtttagccaggaaagtaaagaggccattgaa
atagaagaggagattattactgccaaggacaccattaagaccatagagcacgaatatcac
ctgatcactactcctgaaaagaggaaagagctggttgcatacttaaaaaagcaaaaggaa
ttctgctttgacactgaaaccactgacatagatgctgtagaagccgaggtggttggtttg
gctatttcataccttaaaggagaggccttctacgtgagcgtgcctgaaaataaagaggag
gctaccgcggttttaaatgattttaaagagattttagaagattcgaaaattggcaaaatc
ggccaaaatctaaaatatgatattttggtgctgaagaaatatggcatcaatgtaaaaggt
caaatatttgacaccatgctagctcactacctgcttgagccggaaacaaagcacagcatg
gatgtaattgcagaacaatatctgcactacattccaattcctatctctgatgtcttagga
ccaaaaggcaaaaaacagcttaacatgcgtgacctcgaccctaaagatgtggtagagtac
gcaggagaagatgctgatatcactttacaattaaaagtgaggctggacgaagagataaat
aaggaaggcttagataagcttctcaatgatgtggagcatccattggtgcaagtattagct
caaatggagtatgaaggagtgaagatagatgaaagcgctcttcatgatatgagcaaggaa
cttcaggaagcaagcttagaggctcagaatgagatatttgagcttgcaggtcaggagttc
aatatcgcatctcccaaacagctgggagaggttttattcgataagctgaagcttatggat
aagcctaaaaaaaccaaatctggccaatatgctactggtgaagaaatactgagccgctta
gctggtgagcacaaaatctgtagtagaattctcgattttagggagtatcaaaaactaaaa
tctacttatgtagatgctcttcctaaaatgatcagtggtgatggcagggtgcatacagac
tatggacaagccgtggctgccaccggtaggttaagctctaataatcctaacctgcaaaat
attcctattagaacggaaaaaggcagagagattagaaaggcatttgttccaagagatgaa
aaccatgcgctactggctgcggattatagccagatagagctgagaatagcagcatcattt
gctcaagacaaggatatgatctctgcatttaaggaagggagagacattcacgccactact
gctgccaaagtatttaatgtggctttagaagacgtggatccaaacatgcgtagaaaggct
aaggaggtaaactttggtatcatttacggaatttcagcttttggcttatctcaaaactta
aacattccaaggtctgaggccagtgatattataaaatcctactttaaagagttcccatct
atcagagcttatatggacgattcaatccagaaggctaaggaaaaggaatatgtcgaaact
ctaatgggcagaagaagatatttaagagatatcaactcacgaaatgccaccatgagaggt
tatgccgaaagaaatgccattaatgcgcctattcagggtagcgcagcagacatcataaaa
gtagccatggtgaagattcacgaatggctgcaaaaggaaaatctcaaaaccaaaatgatt
atgcaggtgcatgatgaattggtgtttgatgttcctaaagatgagctggatatagtaaaa
ccaaagattgtagagctaatgacatctgcggtagaccttgaagtgcctatggaggtagaa
gccggcgtaggtgaaaactggctaaaagcacactag
DBGET
integrated database retrieval system
