Fulvivirga ligni: LVD16_05860
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Entry
LVD16_05860 CDS
T09288
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
flw
Fulvivirga ligni
Pathway
flw00260
Glycine, serine and threonine metabolism
flw00460
Cyanoamino acid metabolism
flw00630
Glyoxylate and dicarboxylate metabolism
flw00670
One carbon pool by folate
flw00680
Methane metabolism
flw01100
Metabolic pathways
flw01110
Biosynthesis of secondary metabolites
flw01120
Microbial metabolism in diverse environments
flw01200
Carbon metabolism
flw01230
Biosynthesis of amino acids
flw01240
Biosynthesis of cofactors
flw04981
Folate transport and metabolism
Module
flw_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LVD16_05860
09102 Energy metabolism
00680 Methane metabolism
LVD16_05860
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LVD16_05860
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LVD16_05860
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LVD16_05860
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LVD16_05860
Enzymes [BR:
flw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LVD16_05860
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
UII22749
LinkDB
All DBs
Position
complement(1313131..1314402)
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AA seq
423 aa
AA seq
DB search
MQKDTAIFDLIEKEKHRQESGIELIASENFTSPQVMEAMGTVLTNKYAEGLPGKRYYGGC
EVVDEIEQLAIDRAKELFGASWVNVQPHSGAQANAAVMLAVLEAGDKILGFDLSHGGHLT
HGSPVNFSGKLYKPTSYGVEKETGLIDFDKVVETAKKEKPKLIVCGASAYSRDWDYATLR
KAADEVGALLLADISHPSGLIARGLLNDPLEHCHIVTTTTHKTLRGPRGGMIMIGENFEN
PWGLKTPKGEIKKISAILDSGVFPGTQGGPLEHVIAAKAIAYQEALSDDYLQYVVQVAKN
AKVMAKAFIDKGYKIISGGTDNHMMLIDLRSKDLTGKIAENTLIKADITINKNMVPFDDQ
SPFVTSGMRIGTAAITTRGMKEDDMTKVVDLIDRCLTNHENDDELNQIKSEVNTWMKNFP
LYK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagatacagcaatcttcgacctaattgaaaaagaaaagcacagacaagagtct
ggcatagagctaattgcttcagaaaactttacctcaccacaagtgatggaagctatgggc
accgtgcttactaacaaatatgcagagggcctgccaggcaagaggtattatggtggttgt
gaagtggtggatgagattgagcagttggccatcgatagagctaaagagctttttggtgct
agctgggtaaatgtgcagccgcactctggagctcaggctaatgccgcagtgatgctagcc
gtattagaagcaggtgataaaatattgggctttgacctatctcatggaggtcaccttact
cacggctcaccggtaaacttttcaggtaagctttacaagccaacttcttacggtgtagaa
aaagaaaccggccttatcgattttgataaagttgtagaaactgctaagaaagaaaagcct
aagttaattgtatgtggagcttccgcttacagccgtgactgggactacgcaacattaaga
aaagctgcagacgaggtaggagctttattattagcagatatttcacatccatcagggctt
attgccagaggattattaaatgatccattggagcattgccatattgttaccactactact
cacaaaaccttgagaggaccaagaggtggaatgataatgataggtgaaaactttgaaaac
ccttggggactaaaaactcctaaaggagaaataaagaaaatttctgccatattagattct
ggtgtattcccagggacacaaggcggaccattagagcacgtaattgccgctaaagccata
gcttatcaagaagcattaagcgatgactacttacaatatgtagttcaggtagctaaaaat
gctaaagtaatggccaaagcatttatcgataaaggttataaaatcatttctggaggaaca
gataaccacatgatgttaatagatctgagatctaaagacttaactggtaaaattgctgag
aacactttgatcaaagctgacattactattaataagaacatggttccttttgatgatcag
tctccatttgttacttcaggtatgagaataggtactgctgccatcactaccagaggtatg
aaagaagatgatatgaccaaagtggttgatttaatagacagatgtcttactaaccacgaa
aatgatgatgaacttaaccagattaaatctgaggttaatacctggatgaaaaacttcccg
ttatataaatag
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